Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RNF223E7ERA6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RNF223E7ERA6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.07□□□□□ -1.92
RNF223E7ERA6 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
RNF223E7ERA6 RNU1-58P-201ENST00000362413 163 ntBASIC3.07□□□□□ -1.92
RNF223E7ERA6 SNORA38.1-201ENST00000364172 131 ntBASIC3.07□□□□□ -1.92
RNF223E7ERA6 RNU6-949P-201ENST00000384040 107 ntBASIC3.07□□□□□ -1.92
RNF223E7ERA6 MIR660-201ENST00000385235 97 ntBASIC3.07□□□□□ -1.92
RNF223E7ERA6 RNA5SP120-201ENST00000410900 112 ntBASIC3.07□□□□□ -1.92
RNF223E7ERA6 RNU6-75P-201ENST00000515944 104 ntBASIC3.07□□□□□ -1.92
RNF223E7ERA6 AL662814.1-201ENST00000617364 121 ntBASIC3.07□□□□□ -1.92
RNF223E7ERA6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
RNF223E7ERA6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.07□□□□□ -1.92
RNF223E7ERA6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RNF223E7ERA6 AP001486.2-201ENST00000561652 5113 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.06□□□□□ -1.92
RNF223E7ERA6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RNF223E7ERA6 SNORD115-3-201ENST00000363100 82 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RNF223E7ERA6 AL023284.1-201ENST00000403956 276 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 AC017083.1-201ENST00000428093 483 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 CYCSP4-201ENST00000429682 331 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 AC115115.1-201ENST00000449927 248 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 HMGN2P7-201ENST00000456186 273 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 RN7SL594P-201ENST00000470590 287 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 RNA5SP208-201ENST00000516156 78 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 AC104027.1-201ENST00000521887 300 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNF223E7ERA6 AC138749.4-201ENST00000563970 127 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 AL360157.1-201ENST00000565962 87 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 AL365361.1-201ENST00000566942 3481 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 AC026271.5-201ENST00000577873 130 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 SNORD92-201ENST00000585078 85 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.06□□□□□ -1.92
RNF223E7ERA6 LINC00901.1-201ENST00000617252 152 ntBASIC3.06□□□□□ -1.92
RNF223E7ERA6 LINC02471-203ENST00000641941 4752 ntBASIC3.05□□□□□ -1.92
RNF223E7ERA6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.05□□□□□ -1.92
RNF223E7ERA6 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RNF223E7ERA6 Y_RNA.36-201ENST00000362602 112 ntBASIC3.05□□□□□ -1.92
RNF223E7ERA6 SNORD36A-201ENST00000362874 73 ntBASIC3.05□□□□□ -1.92
RNF223E7ERA6 Y_RNA.283-201ENST00000364798 112 ntBASIC3.05□□□□□ -1.92
RNF223E7ERA6 RNU6-205P-201ENST00000390858 107 ntBASIC3.05□□□□□ -1.92
RNF223E7ERA6 RNA5SP424-201ENST00000390988 115 ntBASIC3.05□□□□□ -1.92
RNF223E7ERA6 MIR4298-201ENST00000584380 73 ntBASIC3.05□□□□□ -1.92
RNF223E7ERA6 MIR7851-201ENST00000610611 160 ntBASIC3.05□□□□□ -1.92
RNF223E7ERA6 AL356274.2-201ENST00000624379 3752 ntBASIC3.05□□□□□ -1.92
RNF223E7ERA6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RNF223E7ERA6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RNF223E7ERA6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
RNF223E7ERA6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RNF223E7ERA6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RNF223E7ERA6 RNU1-33P-201ENST00000364249 162 ntBASIC3.04□□□□□ -1.92
RNF223E7ERA6 BX276092.1-201ENST00000427368 251 ntBASIC3.04□□□□□ -1.92
RNF223E7ERA6 AC025518.1-201ENST00000479856 347 ntBASIC3.04□□□□□ -1.92
RNF223E7ERA6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.04□□□□□ -1.92
RNF223E7ERA6 SNORA70.18-201ENST00000516696 98 ntBASIC3.04□□□□□ -1.92
RNF223E7ERA6 AC008011.1-201ENST00000545989 227 ntBASIC3.04□□□□□ -1.92
RNF223E7ERA6 MIR548AO-201ENST00000579992 96 ntBASIC3.04□□□□□ -1.92
RNF223E7ERA6 AL137849.1-201ENST00000604767 169 ntBASIC3.04□□□□□ -1.92
RNF223E7ERA6 AC021506.2-201ENST00000612354 169 ntBASIC3.04□□□□□ -1.92
RNF223E7ERA6 AP000553.6-201ENST00000641242 118 ntBASIC3.04□□□□□ -1.92
RNF223E7ERA6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RNF223E7ERA6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RNF223E7ERA6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RNF223E7ERA6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RNF223E7ERA6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.03□□□□□ -1.92
RNF223E7ERA6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.03□□□□□ -1.92
RNF223E7ERA6 MIR29C-201ENST00000385231 88 ntBASIC3.03□□□□□ -1.92
RNF223E7ERA6 RNU6-1254P-201ENST00000391266 104 ntBASIC3.03□□□□□ -1.92
RNF223E7ERA6 MIR942-201ENST00000401111 86 ntBASIC3.03□□□□□ -1.92
RNF223E7ERA6 AC005326.1-201ENST00000429197 123 ntBASIC3.03□□□□□ -1.92
RNF223E7ERA6 RNU2-27P-201ENST00000516185 142 ntBASIC3.03□□□□□ -1.92
RNF223E7ERA6 MIR4764-201ENST00000580680 88 ntBASIC3.03□□□□□ -1.92
RNF223E7ERA6 MIR3616-201ENST00000584070 92 ntBASIC3.03□□□□□ -1.92
RNF223E7ERA6 AC012531.5-201ENST00000611375 151 ntBASIC3.03□□□□□ -1.92
RNF223E7ERA6 AC022149.2-201ENST00000621061 203 ntBASIC3.03□□□□□ -1.92
RNF223E7ERA6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.03□□□□□ -1.93
RNF223E7ERA6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.02□□□□□ -1.93
RNF223E7ERA6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RNF223E7ERA6 RNU1-70P-201ENST00000362618 164 ntBASIC3.02□□□□□ -1.93
RNF223E7ERA6 RNU6-243P-201ENST00000391140 107 ntBASIC3.02□□□□□ -1.93
RNF223E7ERA6 RNU1-101P-201ENST00000391171 127 ntBASIC3.02□□□□□ -1.93
RNF223E7ERA6 RNU6-630P-201ENST00000391258 106 ntBASIC3.02□□□□□ -1.93
RNF223E7ERA6 AC019129.1-201ENST00000403786 261 ntBASIC3.02□□□□□ -1.93
RNF223E7ERA6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.02□□□□□ -1.93
RNF223E7ERA6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.02□□□□□ -1.93
RNF223E7ERA6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.02□□□□□ -1.93
RNF223E7ERA6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.02□□□□□ -1.93
RNF223E7ERA6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
RNF223E7ERA6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.02□□□□□ -1.93
RNF223E7ERA6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RNF223E7ERA6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
RNF223E7ERA6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RNF223E7ERA6 RNU4-35P-201ENST00000362588 141 ntBASIC3.01□□□□□ -1.93
RNF223E7ERA6 RNU6-466P-201ENST00000391224 103 ntBASIC3.01□□□□□ -1.93
RNF223E7ERA6 HMGN2P39-201ENST00000398005 273 ntBASIC3.01□□□□□ -1.93
RNF223E7ERA6 MIR8057-201ENST00000620957 69 ntBASIC3.01□□□□□ -1.93
RNF223E7ERA6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RNF223E7ERA6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.01□□□□□ -1.93
RNF223E7ERA6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms