Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 Y_RNA.497-201ENST00000384447 98 ntBASIC2.16□□□□□ -2.06
PTPDC1A2A3K4 MIR518F-201ENST00000384973 87 ntBASIC2.16□□□□□ -2.06
PTPDC1A2A3K4 MIR17-201ENST00000385012 84 ntBASIC2.16□□□□□ -2.06
PTPDC1A2A3K4 TMSB4XP3-201ENST00000445144 114 ntBASIC2.16□□□□□ -2.06
PTPDC1A2A3K4 RNU7-197P-201ENST00000458836 62 ntBASIC2.16□□□□□ -2.06
PTPDC1A2A3K4 RNU6-426P-201ENST00000516464 97 ntBASIC2.16□□□□□ -2.06
PTPDC1A2A3K4 AC022254.1-201ENST00000567857 235 ntBASIC2.16□□□□□ -2.06
PTPDC1A2A3K4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.16□□□□□ -2.06
PTPDC1A2A3K4 MIR3910-1-201ENST00000580936 111 ntBASIC2.16□□□□□ -2.06
PTPDC1A2A3K4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PTPDC1A2A3K4 SNORD3E-202ENST00000627253 216 ntBASIC2.16□□□□□ -2.06
PTPDC1A2A3K4 Y_RNA.140-201ENST00000363474 103 ntBASIC2.15□□□□□ -2.07
PTPDC1A2A3K4 SNORA16.1-201ENST00000364597 132 ntBASIC2.15□□□□□ -2.07
PTPDC1A2A3K4 RNU6-1292P-201ENST00000383856 107 ntBASIC2.15□□□□□ -2.07
PTPDC1A2A3K4 SNORA1-201ENST00000384107 130 ntBASIC2.15□□□□□ -2.07
PTPDC1A2A3K4 MIR624-201ENST00000385217 97 ntBASIC2.15□□□□□ -2.07
PTPDC1A2A3K4 RNA5SP127-201ENST00000411051 133 ntBASIC2.15□□□□□ -2.07
PTPDC1A2A3K4 AC015922.2-201ENST00000435593 184 ntBASIC2.15□□□□□ -2.07
PTPDC1A2A3K4 AC092991.1-201ENST00000477176 376 ntBASIC2.15□□□□□ -2.07
PTPDC1A2A3K4 SNORA18.4-201ENST00000516440 124 ntBASIC2.15□□□□□ -2.07
PTPDC1A2A3K4 RNU7-25P-201ENST00000516544 62 ntBASIC2.15□□□□□ -2.07
PTPDC1A2A3K4 MIR3129-201ENST00000581095 76 ntBASIC2.15□□□□□ -2.07
PTPDC1A2A3K4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.14□□□□□ -2.07
PTPDC1A2A3K4 Y_RNA.547-201ENST00000384654 119 ntBASIC2.14□□□□□ -2.07
PTPDC1A2A3K4 MIR452-201ENST00000385020 85 ntBASIC2.14□□□□□ -2.07
PTPDC1A2A3K4 RPL23AP6-201ENST00000446637 472 ntBASIC2.14□□□□□ -2.07
PTPDC1A2A3K4 RN7SL274P-201ENST00000492268 272 ntBASIC2.14□□□□□ -2.07
PTPDC1A2A3K4 RPS29P11-201ENST00000496507 171 ntBASIC2.14□□□□□ -2.07
PTPDC1A2A3K4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.14□□□□□ -2.07
PTPDC1A2A3K4 RNU6-406P-201ENST00000516470 107 ntBASIC2.14□□□□□ -2.07
PTPDC1A2A3K4 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
PTPDC1A2A3K4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
PTPDC1A2A3K4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
PTPDC1A2A3K4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
PTPDC1A2A3K4 AL442644.1-201ENST00000454390 3105 ntBASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 RNU1-17P-201ENST00000363022 152 ntBASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 RNU6-414P-201ENST00000363705 104 ntBASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 Y_RNA.251-201ENST00000364551 99 ntBASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 RNU6-203P-201ENST00000384038 104 ntBASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 AC093850.1-201ENST00000454121 251 ntBASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 RNU6-830P-201ENST00000516353 107 ntBASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 MIR4299-201ENST00000577899 72 ntBASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 MIR4713-201ENST00000582691 75 ntBASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 AC131055.1-201ENST00000584626 316 ntBASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 AC134878.1-201ENST00000619901 243 ntBASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 AC015726.2-201ENST00000620112 122 ntBASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 AC010332.2-201ENST00000613083 1904 ntBASIC2.13□□□□□ -2.07
PTPDC1A2A3K4 RNU6-661P-201ENST00000362409 107 ntBASIC2.12□□□□□ -2.07
PTPDC1A2A3K4 SNORD115-28-201ENST00000363931 81 ntBASIC2.12□□□□□ -2.07
PTPDC1A2A3K4 MIR194-1-201ENST00000384892 85 ntBASIC2.12□□□□□ -2.07
PTPDC1A2A3K4 MIR9-3-201ENST00000385084 90 ntBASIC2.12□□□□□ -2.07
PTPDC1A2A3K4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PTPDC1A2A3K4 Y_RNA.584-201ENST00000391090 114 ntBASIC2.12□□□□□ -2.07
PTPDC1A2A3K4 HMGN2P19-201ENST00000425149 265 ntBASIC2.12□□□□□ -2.07
PTPDC1A2A3K4 MIR4778-201ENST00000577635 80 ntBASIC2.12□□□□□ -2.07
PTPDC1A2A3K4 ICE2P2-201ENST00000483823 2787 ntBASIC2.12□□□□□ -2.07
PTPDC1A2A3K4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PTPDC1A2A3K4 Y_RNA.410-201ENST00000383992 113 ntBASIC2.11□□□□□ -2.07
PTPDC1A2A3K4 SNORD77.3-201ENST00000391113 65 ntBASIC2.11□□□□□ -2.07
PTPDC1A2A3K4 AF228730.3-201ENST00000436691 102 ntBASIC2.11□□□□□ -2.07
PTPDC1A2A3K4 JTBP1-201ENST00000441314 247 ntBASIC2.11□□□□□ -2.07
PTPDC1A2A3K4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.11□□□□□ -2.07
PTPDC1A2A3K4 RNA5SP272-201ENST00000516095 111 ntBASIC2.11□□□□□ -2.07
PTPDC1A2A3K4 AC084768.2-201ENST00000622736 221 ntBASIC2.11□□□□□ -2.07
PTPDC1A2A3K4 AC091895.1-201ENST00000624494 256 ntBASIC2.11□□□□□ -2.07
PTPDC1A2A3K4 RNY1P11-201ENST00000363759 113 ntBASIC2.1□□□□□ -2.07
PTPDC1A2A3K4 Y_RNA.420-201ENST00000384043 110 ntBASIC2.1□□□□□ -2.07
PTPDC1A2A3K4 AC004965.1-201ENST00000413033 213 ntBASIC2.1□□□□□ -2.07
PTPDC1A2A3K4 MIR4419B-201ENST00000577260 68 ntBASIC2.1□□□□□ -2.07
PTPDC1A2A3K4 MIR8081-201ENST00000611533 95 ntBASIC2.1□□□□□ -2.07
PTPDC1A2A3K4 uc_338.20-201ENST00000621563 178 ntBASIC2.1□□□□□ -2.07
PTPDC1A2A3K4 AC132825.6-201ENST00000638861 357 ntBASIC2.1□□□□□ -2.07
PTPDC1A2A3K4 Y_RNA.37-201ENST00000362606 108 ntBASIC2.09□□□□□ -2.07
PTPDC1A2A3K4 RNU6-439P-201ENST00000384188 106 ntBASIC2.09□□□□□ -2.07
PTPDC1A2A3K4 MIR136-201ENST00000385207 82 ntBASIC2.09□□□□□ -2.07
PTPDC1A2A3K4 SNORA40-201ENST00000388090 126 ntBASIC2.09□□□□□ -2.07
PTPDC1A2A3K4 RNU6-460P-201ENST00000391158 108 ntBASIC2.09□□□□□ -2.07
PTPDC1A2A3K4 RNU6-257P-201ENST00000410238 98 ntBASIC2.09□□□□□ -2.07
PTPDC1A2A3K4 AL161935.2-201ENST00000414627 60 ntBASIC2.09□□□□□ -2.07
PTPDC1A2A3K4 AC087499.4-201ENST00000448505 178 ntBASIC2.09□□□□□ -2.07
PTPDC1A2A3K4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.09□□□□□ -2.07
PTPDC1A2A3K4 AP001340.1-201ENST00000624405 217 ntBASIC2.09□□□□□ -2.07
PTPDC1A2A3K4 AC095038.3-201ENST00000634439 195 ntBASIC2.09□□□□□ -2.07
PTPDC1A2A3K4 Y_RNA.338-201ENST00000365320 114 ntBASIC2.08□□□□□ -2.08
PTPDC1A2A3K4 SNORA20-201ENST00000384662 132 ntBASIC2.08□□□□□ -2.08
PTPDC1A2A3K4 MIR516B2-201ENST00000385190 85 ntBASIC2.08□□□□□ -2.08
PTPDC1A2A3K4 Y_RNA.586-201ENST00000391146 98 ntBASIC2.08□□□□□ -2.08
PTPDC1A2A3K4 RNU4-57P-201ENST00000515980 135 ntBASIC2.08□□□□□ -2.08
PTPDC1A2A3K4 SNORA25.15-201ENST00000516487 89 ntBASIC2.08□□□□□ -2.08
PTPDC1A2A3K4 AP000942.3-201ENST00000603702 160 ntBASIC2.08□□□□□ -2.08
PTPDC1A2A3K4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
PTPDC1A2A3K4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PTPDC1A2A3K4 Y_RNA.52-201ENST00000362760 96 ntBASIC2.07□□□□□ -2.08
PTPDC1A2A3K4 Y_RNA.120-201ENST00000363304 110 ntBASIC2.07□□□□□ -2.08
PTPDC1A2A3K4 SNORD48-201ENST00000364953 64 ntBASIC2.07□□□□□ -2.08
PTPDC1A2A3K4 RNU6-81P-201ENST00000365608 104 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms