Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL445687.1-201ENST00000439946 251 ntBASIC3.07□□□□□ -1.92
RTCBQ9Y3I0 HMGN2P32-201ENST00000444648 269 ntBASIC3.07□□□□□ -1.92
RTCBQ9Y3I0 AC021443.1-201ENST00000604478 211 ntBASIC3.07□□□□□ -1.92
RTCBQ9Y3I0 RNU6-94P-201ENST00000607728 107 ntBASIC3.07□□□□□ -1.92
RTCBQ9Y3I0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.07□□□□□ -1.92
RTCBQ9Y3I0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
RTCBQ9Y3I0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.07□□□□□ -1.92
RTCBQ9Y3I0 Y_RNA.323-201ENST00000365157 109 ntBASIC3.06□□□□□ -1.92
RTCBQ9Y3I0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RTCBQ9Y3I0 SNORA11.4-201ENST00000408823 129 ntBASIC3.06□□□□□ -1.92
RTCBQ9Y3I0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RTCBQ9Y3I0 RNA5SP344-201ENST00000411081 104 ntBASIC3.06□□□□□ -1.92
RTCBQ9Y3I0 RNU6-938P-201ENST00000411285 103 ntBASIC3.06□□□□□ -1.92
RTCBQ9Y3I0 AC087499.4-201ENST00000448505 178 ntBASIC3.06□□□□□ -1.92
RTCBQ9Y3I0 RPL39P34-201ENST00000477141 156 ntBASIC3.06□□□□□ -1.92
RTCBQ9Y3I0 AC026436.1-201ENST00000510537 270 ntBASIC3.06□□□□□ -1.92
RTCBQ9Y3I0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.06□□□□□ -1.92
RTCBQ9Y3I0 AC016717.2-201ENST00000609089 5141 ntBASIC3.06□□□□□ -1.92
RTCBQ9Y3I0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 AL161431.1-201ENST00000618966 4205 ntBASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 RNU6-414P-201ENST00000363705 104 ntBASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 RNA5SP99-201ENST00000364020 114 ntBASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 SNORD56.5-201ENST00000364281 72 ntBASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 Y_RNA.348-201ENST00000365403 103 ntBASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 RNY1P6-201ENST00000384193 109 ntBASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 RNU6-1113P-201ENST00000384348 107 ntBASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 U8.17-201ENST00000391292 132 ntBASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 AL606517.2-201ENST00000442855 241 ntBASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 RNU6-548P-201ENST00000517083 115 ntBASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 AP003484.1-201ENST00000530974 250 ntBASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 AC026271.5-201ENST00000577873 130 ntBASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 MIR6873-201ENST00000622788 63 ntBASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.05□□□□□ -1.92
RTCBQ9Y3I0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.04□□□□□ -1.92
RTCBQ9Y3I0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.04□□□□□ -1.92
RTCBQ9Y3I0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
RTCBQ9Y3I0 Y_RNA.298-201ENST00000364960 107 ntBASIC3.04□□□□□ -1.92
RTCBQ9Y3I0 Y_RNA.362-201ENST00000365518 110 ntBASIC3.04□□□□□ -1.92
RTCBQ9Y3I0 RNU6-905P-201ENST00000384434 107 ntBASIC3.04□□□□□ -1.92
RTCBQ9Y3I0 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.04□□□□□ -1.92
RTCBQ9Y3I0 RNU7-80P-201ENST00000459562 61 ntBASIC3.04□□□□□ -1.92
RTCBQ9Y3I0 SNORA18.7-201ENST00000516910 131 ntBASIC3.04□□□□□ -1.92
RTCBQ9Y3I0 AP001318.4-201ENST00000616637 121 ntBASIC3.04□□□□□ -1.92
RTCBQ9Y3I0 AC015726.2-201ENST00000620112 122 ntBASIC3.04□□□□□ -1.92
RTCBQ9Y3I0 MIR6733-201ENST00000635723 61 ntBASIC3.04□□□□□ -1.92
RTCBQ9Y3I0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RTCBQ9Y3I0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.03□□□□□ -1.92
RTCBQ9Y3I0 Y_RNA.351-201ENST00000365436 96 ntBASIC3.03□□□□□ -1.92
RTCBQ9Y3I0 RNA5SP109-201ENST00000391010 116 ntBASIC3.03□□□□□ -1.92
RTCBQ9Y3I0 SNORD88.1-201ENST00000408684 91 ntBASIC3.03□□□□□ -1.92
RTCBQ9Y3I0 UBBP3-201ENST00000445497 241 ntBASIC3.03□□□□□ -1.92
RTCBQ9Y3I0 SUMO2P16-201ENST00000519475 264 ntBASIC3.03□□□□□ -1.92
RTCBQ9Y3I0 MIR4778-201ENST00000577635 80 ntBASIC3.03□□□□□ -1.92
RTCBQ9Y3I0 MIR5092-201ENST00000583139 88 ntBASIC3.03□□□□□ -1.92
RTCBQ9Y3I0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.03□□□□□ -1.92
RTCBQ9Y3I0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RTCBQ9Y3I0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
RTCBQ9Y3I0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.02□□□□□ -1.93
RTCBQ9Y3I0 Y_RNA.454-201ENST00000384224 113 ntBASIC3.02□□□□□ -1.93
RTCBQ9Y3I0 MIR627-201ENST00000384979 97 ntBASIC3.02□□□□□ -1.93
RTCBQ9Y3I0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.02□□□□□ -1.93
RTCBQ9Y3I0 RNU7-164P-201ENST00000459221 62 ntBASIC3.02□□□□□ -1.93
RTCBQ9Y3I0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.02□□□□□ -1.93
RTCBQ9Y3I0 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.02□□□□□ -1.93
RTCBQ9Y3I0 MIR8054-201ENST00000620877 86 ntBASIC3.02□□□□□ -1.93
RTCBQ9Y3I0 AC022513.1-201ENST00000624512 117 ntBASIC3.02□□□□□ -1.93
RTCBQ9Y3I0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RTCBQ9Y3I0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.02□□□□□ -1.93
RTCBQ9Y3I0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RTCBQ9Y3I0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RTCBQ9Y3I0 RNU6-640P-201ENST00000363693 105 ntBASIC3.01□□□□□ -1.93
RTCBQ9Y3I0 SNORD38C-201ENST00000384381 69 ntBASIC3.01□□□□□ -1.93
RTCBQ9Y3I0 RNU6-440P-201ENST00000390882 105 ntBASIC3.01□□□□□ -1.93
RTCBQ9Y3I0 RN7SL499P-201ENST00000481141 276 ntBASIC3.01□□□□□ -1.93
RTCBQ9Y3I0 AC114811.1-201ENST00000507207 168 ntBASIC3.01□□□□□ -1.93
RTCBQ9Y3I0 RNU6-830P-201ENST00000516353 107 ntBASIC3.01□□□□□ -1.93
RTCBQ9Y3I0 AC005786.1-201ENST00000588553 154 ntBASIC3.01□□□□□ -1.93
RTCBQ9Y3I0 SNORA28-201ENST00000606769 126 ntBASIC3.01□□□□□ -1.93
RTCBQ9Y3I0 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.01□□□□□ -1.93
RTCBQ9Y3I0 ICE2P2-201ENST00000483823 2787 ntBASIC3□□□□□ -1.93
RTCBQ9Y3I0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3□□□□□ -1.93
RTCBQ9Y3I0 SNORD115-3-201ENST00000363100 82 ntBASIC3□□□□□ -1.93
RTCBQ9Y3I0 AL627390.1-201ENST00000396055 340 ntBASIC3□□□□□ -1.93
RTCBQ9Y3I0 RNA5SP492-201ENST00000411330 114 ntBASIC3□□□□□ -1.93
RTCBQ9Y3I0 STAG3L5P-204ENST00000443759 179 ntBASIC3□□□□□ -1.93
RTCBQ9Y3I0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RTCBQ9Y3I0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 RNU1-58P-201ENST00000362413 163 ntBASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 U8.6-201ENST00000364939 135 ntBASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 RNU6-163P-201ENST00000384396 106 ntBASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 Y_RNA.544-201ENST00000384650 113 ntBASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 MIR29C-201ENST00000385231 88 ntBASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 MT-TI-201ENST00000387365 69 ntBASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 SNORA40.13-201ENST00000516379 120 ntBASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 AC068339.1-201ENST00000526965 141 ntBASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 MIR5009-201ENST00000578736 100 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms