Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 Y_RNA.91-201ENST00000363042 107 ntBASIC2.16□□□□□ -2.06
USP25Q9UHP3 Y_RNA.242-201ENST00000364473 110 ntBASIC2.16□□□□□ -2.06
USP25Q9UHP3 U8.5-201ENST00000364528 136 ntBASIC2.16□□□□□ -2.06
USP25Q9UHP3 RNU6-950P-201ENST00000384651 107 ntBASIC2.16□□□□□ -2.06
USP25Q9UHP3 SNORD37.2-201ENST00000391075 66 ntBASIC2.16□□□□□ -2.06
USP25Q9UHP3 MIR548I2-201ENST00000408348 149 ntBASIC2.16□□□□□ -2.06
USP25Q9UHP3 RNU6-257P-201ENST00000410238 98 ntBASIC2.16□□□□□ -2.06
USP25Q9UHP3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.16□□□□□ -2.06
USP25Q9UHP3 AC108210.2-201ENST00000503681 201 ntBASIC2.16□□□□□ -2.06
USP25Q9UHP3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.16□□□□□ -2.06
USP25Q9UHP3 AC008507.4-201ENST00000585464 127 ntBASIC2.16□□□□□ -2.06
USP25Q9UHP3 Pinc.1-201ENST00000616452 154 ntBASIC2.16□□□□□ -2.06
USP25Q9UHP3 AC010332.2-201ENST00000613083 1904 ntBASIC2.16□□□□□ -2.06
USP25Q9UHP3 Y_RNA.66-201ENST00000362862 102 ntBASIC2.15□□□□□ -2.07
USP25Q9UHP3 RNU6-414P-201ENST00000363705 104 ntBASIC2.15□□□□□ -2.07
USP25Q9UHP3 MIR522-201ENST00000385071 87 ntBASIC2.15□□□□□ -2.07
USP25Q9UHP3 RNA5SP109-201ENST00000391010 116 ntBASIC2.15□□□□□ -2.07
USP25Q9UHP3 RNU2-70P-201ENST00000410718 179 ntBASIC2.15□□□□□ -2.07
USP25Q9UHP3 AC245047.3-201ENST00000429428 127 ntBASIC2.15□□□□□ -2.07
USP25Q9UHP3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
USP25Q9UHP3 AL606517.2-201ENST00000442855 241 ntBASIC2.15□□□□□ -2.07
USP25Q9UHP3 AC092991.1-201ENST00000477176 376 ntBASIC2.15□□□□□ -2.07
USP25Q9UHP3 SNORA25.12-201ENST00000516202 82 ntBASIC2.15□□□□□ -2.07
USP25Q9UHP3 RNU2-56P-201ENST00000516826 190 ntBASIC2.15□□□□□ -2.07
USP25Q9UHP3 Y_RNA.714-201ENST00000517065 90 ntBASIC2.15□□□□□ -2.07
USP25Q9UHP3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
USP25Q9UHP3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USP25Q9UHP3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.14□□□□□ -2.07
USP25Q9UHP3 MIR126-201ENST00000362291 85 ntBASIC2.14□□□□□ -2.07
USP25Q9UHP3 Y_RNA.251-201ENST00000364551 99 ntBASIC2.14□□□□□ -2.07
USP25Q9UHP3 SNORA40-201ENST00000388090 126 ntBASIC2.14□□□□□ -2.07
USP25Q9UHP3 RNU6-482P-201ENST00000391068 107 ntBASIC2.14□□□□□ -2.07
USP25Q9UHP3 MIR1289-2-201ENST00000408360 111 ntBASIC2.14□□□□□ -2.07
USP25Q9UHP3 AL606753.1-201ENST00000427435 87 ntBASIC2.14□□□□□ -2.07
USP25Q9UHP3 AL591806.2-201ENST00000433122 173 ntBASIC2.14□□□□□ -2.07
USP25Q9UHP3 snoU13.27-201ENST00000459278 104 ntBASIC2.14□□□□□ -2.07
USP25Q9UHP3 RNU7-28P-201ENST00000516759 62 ntBASIC2.14□□□□□ -2.07
USP25Q9UHP3 AC015712.3-201ENST00000559380 164 ntBASIC2.14□□□□□ -2.07
USP25Q9UHP3 MIR8074-201ENST00000615081 81 ntBASIC2.14□□□□□ -2.07
USP25Q9UHP3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
USP25Q9UHP3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
USP25Q9UHP3 SNORA25.7-201ENST00000364375 127 ntBASIC2.13□□□□□ -2.07
USP25Q9UHP3 RNU6-1082P-201ENST00000364574 107 ntBASIC2.13□□□□□ -2.07
USP25Q9UHP3 Y_RNA.486-201ENST00000384398 107 ntBASIC2.13□□□□□ -2.07
USP25Q9UHP3 RNU6-959P-201ENST00000384671 107 ntBASIC2.13□□□□□ -2.07
USP25Q9UHP3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
USP25Q9UHP3 SNORA12.1-201ENST00000390873 148 ntBASIC2.13□□□□□ -2.07
USP25Q9UHP3 RNA5SP482-201ENST00000391269 118 ntBASIC2.13□□□□□ -2.07
USP25Q9UHP3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.13□□□□□ -2.07
USP25Q9UHP3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.13□□□□□ -2.07
USP25Q9UHP3 AC091895.1-201ENST00000624494 256 ntBASIC2.13□□□□□ -2.07
USP25Q9UHP3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.12□□□□□ -2.07
USP25Q9UHP3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USP25Q9UHP3 Y_RNA.420-201ENST00000384043 110 ntBASIC2.12□□□□□ -2.07
USP25Q9UHP3 RNU6-439P-201ENST00000384188 106 ntBASIC2.12□□□□□ -2.07
USP25Q9UHP3 MIR30A-201ENST00000385092 71 ntBASIC2.12□□□□□ -2.07
USP25Q9UHP3 RNU6-588P-201ENST00000410281 105 ntBASIC2.12□□□□□ -2.07
USP25Q9UHP3 RPL31P63-201ENST00000422565 375 ntBASIC2.12□□□□□ -2.07
USP25Q9UHP3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.12□□□□□ -2.07
USP25Q9UHP3 RNU6-365P-201ENST00000517113 106 ntBASIC2.12□□□□□ -2.07
USP25Q9UHP3 MIR3122-201ENST00000577243 73 ntBASIC2.12□□□□□ -2.07
USP25Q9UHP3 MIR4709-201ENST00000577272 72 ntBASIC2.12□□□□□ -2.07
USP25Q9UHP3 AC024614.2-201ENST00000577584 372 ntBASIC2.12□□□□□ -2.07
USP25Q9UHP3 AL365205.2-201ENST00000594586 68 ntBASIC2.12□□□□□ -2.07
USP25Q9UHP3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.12□□□□□ -2.07
USP25Q9UHP3 AP001340.1-201ENST00000624405 217 ntBASIC2.12□□□□□ -2.07
USP25Q9UHP3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.12□□□□□ -2.07
USP25Q9UHP3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
USP25Q9UHP3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
USP25Q9UHP3 SNORA4.2-201ENST00000365313 147 ntBASIC2.11□□□□□ -2.07
USP25Q9UHP3 SNORD24-201ENST00000383884 75 ntBASIC2.11□□□□□ -2.07
USP25Q9UHP3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
USP25Q9UHP3 SNORD72-201ENST00000390994 80 ntBASIC2.11□□□□□ -2.07
USP25Q9UHP3 MTND4LP9-201ENST00000427694 174 ntBASIC2.11□□□□□ -2.07
USP25Q9UHP3 RNA5SP272-201ENST00000516095 111 ntBASIC2.11□□□□□ -2.07
USP25Q9UHP3 AC007751.1-201ENST00000529260 376 ntBASIC2.11□□□□□ -2.07
USP25Q9UHP3 MIR3198-2-201ENST00000577868 80 ntBASIC2.11□□□□□ -2.07
USP25Q9UHP3 MIR8054-201ENST00000620877 86 ntBASIC2.11□□□□□ -2.07
USP25Q9UHP3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USP25Q9UHP3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.1□□□□□ -2.07
USP25Q9UHP3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USP25Q9UHP3 RNY1P11-201ENST00000363759 113 ntBASIC2.1□□□□□ -2.07
USP25Q9UHP3 SNORD48-201ENST00000364953 64 ntBASIC2.1□□□□□ -2.07
USP25Q9UHP3 RNU6-1117P-201ENST00000384525 104 ntBASIC2.1□□□□□ -2.07
USP25Q9UHP3 MIR764-201ENST00000390811 85 ntBASIC2.1□□□□□ -2.07
USP25Q9UHP3 MIR1267-201ENST00000408723 78 ntBASIC2.1□□□□□ -2.07
USP25Q9UHP3 RN7SKP200-201ENST00000410564 320 ntBASIC2.1□□□□□ -2.07
USP25Q9UHP3 JTBP1-201ENST00000441314 247 ntBASIC2.1□□□□□ -2.07
USP25Q9UHP3 RNU6-504P-201ENST00000516568 104 ntBASIC2.1□□□□□ -2.07
USP25Q9UHP3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USP25Q9UHP3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USP25Q9UHP3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
USP25Q9UHP3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
USP25Q9UHP3 RNU6-888P-201ENST00000363010 101 ntBASIC2.09□□□□□ -2.07
USP25Q9UHP3 SNORA16.1-201ENST00000364597 132 ntBASIC2.09□□□□□ -2.07
USP25Q9UHP3 Y_RNA.291-201ENST00000364886 113 ntBASIC2.09□□□□□ -2.07
USP25Q9UHP3 RNU6-440P-201ENST00000390882 105 ntBASIC2.09□□□□□ -2.07
USP25Q9UHP3 RNU6-460P-201ENST00000391158 108 ntBASIC2.09□□□□□ -2.07
USP25Q9UHP3 HMGN2P23-201ENST00000456759 269 ntBASIC2.09□□□□□ -2.07
USP25Q9UHP3 SNORA31.10-201ENST00000516482 106 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms