Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SNORA70.16-201ENST00000516390 95 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-1110P-201ENST00000516462 101 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP470-201ENST00000516463 106 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-347P-201ENST00000516658 105 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-765P-201ENST00000516916 99 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 TRAV8-5-201ENST00000537369 341 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RPL10P14-201ENST00000565265 298 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR4802-201ENST00000581881 80 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR3176-201ENST00000582210 90 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 AL606490.9-201ENST00000603331 271 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 AL139099.4-201ENST00000614802 114 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RPSAP73-201ENST00000614820 330 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 TCL6_3.1-201ENST00000619064 137 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR8080-201ENST00000622224 89 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR133B-201ENST00000362210 119 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR379-201ENST00000362218 67 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-226P-201ENST00000363778 107 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP335-201ENST00000363817 110 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP455-201ENST00000365190 119 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP131-201ENST00000365452 119 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-422P-201ENST00000384632 107 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR526A1-201ENST00000384897 85 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR105-1-201ENST00000385222 81 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR147B-201ENST00000390185 80 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 HMGN2P8-201ENST00000391458 268 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR937-201ENST00000401271 86 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 SNORD93-201ENST00000408813 74 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 AC093578.1-201ENST00000415219 368 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 SRSF1P1-201ENST00000424058 520 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RPS12P10-201ENST00000427031 377 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 KRT8P51-201ENST00000438938 274 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 HAR1A.1-201ENST00000459583 118 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RN7SL222P-201ENST00000476452 299 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RN7SL459P-201ENST00000481078 302 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 AC068522.1-201ENST00000482895 345 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RN7SL30P-201ENST00000488416 306 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP134-201ENST00000516492 96 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP169-201ENST00000517268 117 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-84P-201ENST00000607737 102 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 AC013734.1-201ENST00000619329 111 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 CU639417.4-201ENST00000623928 207 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR4251-201ENST00000635819 61 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 MUC2-202ENST00000613187 4845 ntBASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
KRTAP4-4Q9BYR3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms