Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.64□□□□□ -1.83
LRCH3Q96II8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
LRCH3Q96II8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRCH3Q96II8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
LRCH3Q96II8 SNORA1.2-201ENST00000365189 134 ntBASIC3.63□□□□□ -1.83
LRCH3Q96II8 RHEBP3-201ENST00000411920 351 ntBASIC3.63□□□□□ -1.83
LRCH3Q96II8 SPINT5P-201ENST00000448174 155 ntBASIC3.63□□□□□ -1.83
LRCH3Q96II8 snoU13.26-201ENST00000459452 105 ntBASIC3.63□□□□□ -1.83
LRCH3Q96II8 RN7SL863P-201ENST00000462370 296 ntBASIC3.63□□□□□ -1.83
LRCH3Q96II8 AL020996.3-201ENST00000606617 222 ntBASIC3.63□□□□□ -1.83
LRCH3Q96II8 RNVU1-4-201ENST00000612985 164 ntBASIC3.63□□□□□ -1.83
LRCH3Q96II8 SNORD3E-202ENST00000627253 216 ntBASIC3.63□□□□□ -1.83
LRCH3Q96II8 MIR7515-201ENST00000637837 67 ntBASIC3.63□□□□□ -1.83
LRCH3Q96II8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRCH3Q96II8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.63□□□□□ -1.83
LRCH3Q96II8 AC007336.1-201ENST00000576365 3828 ntBASIC3.63□□□□□ -1.83
LRCH3Q96II8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRCH3Q96II8 Y_RNA.173-201ENST00000363776 113 ntBASIC3.62□□□□□ -1.83
LRCH3Q96II8 Y_RNA.340-201ENST00000365330 92 ntBASIC3.62□□□□□ -1.83
LRCH3Q96II8 Y_RNA.370-201ENST00000365589 108 ntBASIC3.62□□□□□ -1.83
LRCH3Q96II8 Y_RNA.448-201ENST00000384185 108 ntBASIC3.62□□□□□ -1.83
LRCH3Q96II8 RNU6-342P-201ENST00000384521 104 ntBASIC3.62□□□□□ -1.83
LRCH3Q96II8 MIR181B2-201ENST00000385004 89 ntBASIC3.62□□□□□ -1.83
LRCH3Q96II8 RNU6-913P-201ENST00000390913 95 ntBASIC3.62□□□□□ -1.83
LRCH3Q96II8 AL138878.1-201ENST00000405131 347 ntBASIC3.62□□□□□ -1.83
LRCH3Q96II8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.62□□□□□ -1.83
LRCH3Q96II8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.62□□□□□ -1.83
LRCH3Q96II8 RPS29P29-201ENST00000456396 171 ntBASIC3.62□□□□□ -1.83
LRCH3Q96II8 RN7SKP132-201ENST00000516001 208 ntBASIC3.62□□□□□ -1.83
LRCH3Q96II8 MIR3134-201ENST00000579433 74 ntBASIC3.62□□□□□ -1.83
LRCH3Q96II8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.62□□□□□ -1.83
LRCH3Q96II8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.62□□□□□ -1.83
LRCH3Q96II8 TNPO1P3-201ENST00000436471 2662 ntBASIC3.62□□□□□ -1.83
LRCH3Q96II8 AL356274.2-201ENST00000624379 3752 ntBASIC3.62□□□□□ -1.83
LRCH3Q96II8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LRCH3Q96II8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
LRCH3Q96II8 Y_RNA.99-201ENST00000363138 105 ntBASIC3.61□□□□□ -1.83
LRCH3Q96II8 RNU6-865P-201ENST00000364772 107 ntBASIC3.61□□□□□ -1.83
LRCH3Q96II8 SNORA70B-201ENST00000384210 135 ntBASIC3.61□□□□□ -1.83
LRCH3Q96II8 RPS29P31-201ENST00000446147 164 ntBASIC3.61□□□□□ -1.83
LRCH3Q96II8 AC018868.1-201ENST00000491307 315 ntBASIC3.61□□□□□ -1.83
LRCH3Q96II8 RNU6-917P-201ENST00000516294 104 ntBASIC3.61□□□□□ -1.83
LRCH3Q96II8 MIR8054-201ENST00000620877 86 ntBASIC3.61□□□□□ -1.83
LRCH3Q96II8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRCH3Q96II8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRCH3Q96II8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
LRCH3Q96II8 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRCH3Q96II8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.61□□□□□ -1.83
LRCH3Q96II8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRCH3Q96II8 RNU6-283P-201ENST00000364788 107 ntBASIC3.6□□□□□ -1.83
LRCH3Q96II8 SNORA24-201ENST00000384096 131 ntBASIC3.6□□□□□ -1.83
LRCH3Q96II8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.6□□□□□ -1.83
LRCH3Q96II8 RNU6-519P-201ENST00000410590 108 ntBASIC3.6□□□□□ -1.83
LRCH3Q96II8 AC087499.7-201ENST00000441958 109 ntBASIC3.6□□□□□ -1.83
LRCH3Q96II8 HMGN2P7-201ENST00000456186 273 ntBASIC3.6□□□□□ -1.83
LRCH3Q96II8 SCARNA18B-201ENST00000458806 135 ntBASIC3.6□□□□□ -1.83
LRCH3Q96II8 MIR4738-201ENST00000579134 87 ntBASIC3.6□□□□□ -1.83
LRCH3Q96II8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRCH3Q96II8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.6□□□□□ -1.83
LRCH3Q96II8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LRCH3Q96II8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LRCH3Q96II8 RNA5SP184-201ENST00000411071 108 ntBASIC3.59□□□□□ -1.83
LRCH3Q96II8 RNU7-35P-201ENST00000517174 62 ntBASIC3.59□□□□□ -1.83
LRCH3Q96II8 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.59□□□□□ -1.83
LRCH3Q96II8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.59□□□□□ -1.83
LRCH3Q96II8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.59□□□□□ -1.83
LRCH3Q96II8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
LRCH3Q96II8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LRCH3Q96II8 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LRCH3Q96II8 AC245060.5-201ENST00000610778 3293 ntBASIC3.59□□□□□ -1.84
LRCH3Q96II8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
LRCH3Q96II8 RNA5SP295-201ENST00000362655 121 ntBASIC3.58□□□□□ -1.84
LRCH3Q96II8 RNU6-624P-201ENST00000363411 107 ntBASIC3.58□□□□□ -1.84
LRCH3Q96II8 RNU6-160P-201ENST00000384591 107 ntBASIC3.58□□□□□ -1.84
LRCH3Q96II8 MIR516B2-201ENST00000385190 85 ntBASIC3.58□□□□□ -1.84
LRCH3Q96II8 MIR1236-201ENST00000408340 102 ntBASIC3.58□□□□□ -1.84
LRCH3Q96II8 MIR1265-201ENST00000408444 86 ntBASIC3.58□□□□□ -1.84
LRCH3Q96II8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.58□□□□□ -1.84
LRCH3Q96II8 AC006539.3-201ENST00000454258 129 ntBASIC3.58□□□□□ -1.84
LRCH3Q96II8 RNU7-73P-201ENST00000458743 63 ntBASIC3.58□□□□□ -1.84
LRCH3Q96II8 SNORD67.1-201ENST00000516618 108 ntBASIC3.58□□□□□ -1.84
LRCH3Q96II8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.58□□□□□ -1.84
LRCH3Q96II8 AL355297.2-201ENST00000604792 129 ntBASIC3.58□□□□□ -1.84
LRCH3Q96II8 SNORA28-201ENST00000606769 126 ntBASIC3.58□□□□□ -1.84
LRCH3Q96II8 AC012676.2-201ENST00000619258 186 ntBASIC3.58□□□□□ -1.84
LRCH3Q96II8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.58□□□□□ -1.84
LRCH3Q96II8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRCH3Q96II8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.58□□□□□ -1.84
LRCH3Q96II8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LRCH3Q96II8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
LRCH3Q96II8 RNU4-32P-201ENST00000363404 141 ntBASIC3.57□□□□□ -1.84
LRCH3Q96II8 RNU6-1072P-201ENST00000384703 107 ntBASIC3.57□□□□□ -1.84
LRCH3Q96II8 RNU6-443P-201ENST00000384780 107 ntBASIC3.57□□□□□ -1.84
LRCH3Q96II8 MIR561-201ENST00000385216 97 ntBASIC3.57□□□□□ -1.84
LRCH3Q96II8 EEF1A1P41-201ENST00000414667 207 ntBASIC3.57□□□□□ -1.84
LRCH3Q96II8 AL603825.1-201ENST00000438481 80 ntBASIC3.57□□□□□ -1.84
LRCH3Q96II8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.57□□□□□ -1.84
LRCH3Q96II8 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.57□□□□□ -1.84
LRCH3Q96II8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
LRCH3Q96II8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms