Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RNU11-3P-201ENST00000391111 133 ntBASIC2.96□□□□□ -1.94
IFT43Q96FT9 AL034345.1-201ENST00000407768 123 ntBASIC2.96□□□□□ -1.94
IFT43Q96FT9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.96□□□□□ -1.94
IFT43Q96FT9 RNU7-26P-201ENST00000458980 63 ntBASIC2.96□□□□□ -1.94
IFT43Q96FT9 RNA5SP367-201ENST00000516557 118 ntBASIC2.96□□□□□ -1.94
IFT43Q96FT9 RNU7-6P-201ENST00000516845 62 ntBASIC2.96□□□□□ -1.94
IFT43Q96FT9 RNU6-762P-201ENST00000517107 102 ntBASIC2.96□□□□□ -1.94
IFT43Q96FT9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.96□□□□□ -1.94
IFT43Q96FT9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
IFT43Q96FT9 MIR342-201ENST00000362212 99 ntBASIC2.95□□□□□ -1.94
IFT43Q96FT9 SNORA25.6-201ENST00000364121 118 ntBASIC2.95□□□□□ -1.94
IFT43Q96FT9 RNU6-424P-201ENST00000384367 105 ntBASIC2.95□□□□□ -1.94
IFT43Q96FT9 RNU6-950P-201ENST00000384651 107 ntBASIC2.95□□□□□ -1.94
IFT43Q96FT9 SNX2P2-201ENST00000424553 323 ntBASIC2.95□□□□□ -1.94
IFT43Q96FT9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.95□□□□□ -1.94
IFT43Q96FT9 UBBP3-201ENST00000445497 241 ntBASIC2.95□□□□□ -1.94
IFT43Q96FT9 RNA5SP137-201ENST00000516833 135 ntBASIC2.95□□□□□ -1.94
IFT43Q96FT9 RPL12P50-201ENST00000603116 116 ntBASIC2.95□□□□□ -1.94
IFT43Q96FT9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
IFT43Q96FT9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
IFT43Q96FT9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.94□□□□□ -1.94
IFT43Q96FT9 RNU4-36P-201ENST00000364294 144 ntBASIC2.94□□□□□ -1.94
IFT43Q96FT9 Y_RNA.241-201ENST00000364470 117 ntBASIC2.94□□□□□ -1.94
IFT43Q96FT9 RNU6-816P-201ENST00000390914 107 ntBASIC2.94□□□□□ -1.94
IFT43Q96FT9 RNU6-1268P-201ENST00000391214 107 ntBASIC2.94□□□□□ -1.94
IFT43Q96FT9 RNU6-1239P-201ENST00000391310 107 ntBASIC2.94□□□□□ -1.94
IFT43Q96FT9 AC015922.2-201ENST00000435593 184 ntBASIC2.94□□□□□ -1.94
IFT43Q96FT9 HSPE1P9-201ENST00000440046 311 ntBASIC2.94□□□□□ -1.94
IFT43Q96FT9 RNU7-96P-201ENST00000459535 64 ntBASIC2.94□□□□□ -1.94
IFT43Q96FT9 MIR3162-201ENST00000581818 82 ntBASIC2.94□□□□□ -1.94
IFT43Q96FT9 HSPE1P19-201ENST00000603327 295 ntBASIC2.94□□□□□ -1.94
IFT43Q96FT9 AC006023.1-201ENST00000603944 259 ntBASIC2.94□□□□□ -1.94
IFT43Q96FT9 SNORD115-40-201ENST00000606510 82 ntBASIC2.94□□□□□ -1.94
IFT43Q96FT9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.94□□□□□ -1.94
IFT43Q96FT9 AC080100.1-201ENST00000624239 5356 ntBASIC2.94□□□□□ -1.94
IFT43Q96FT9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
IFT43Q96FT9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
IFT43Q96FT9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.93□□□□□ -1.94
IFT43Q96FT9 RNU4-16P-201ENST00000364737 141 ntBASIC2.93□□□□□ -1.94
IFT43Q96FT9 MIR597-201ENST00000384968 97 ntBASIC2.93□□□□□ -1.94
IFT43Q96FT9 AL022718.1-201ENST00000412004 84 ntBASIC2.93□□□□□ -1.94
IFT43Q96FT9 HMGN2P35-201ENST00000412164 270 ntBASIC2.93□□□□□ -1.94
IFT43Q96FT9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.93□□□□□ -1.94
IFT43Q96FT9 RNU6-998P-201ENST00000515894 101 ntBASIC2.93□□□□□ -1.94
IFT43Q96FT9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.93□□□□□ -1.94
IFT43Q96FT9 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.93□□□□□ -1.94
IFT43Q96FT9 DEFB131E-201ENST00000532329 154 ntBASIC2.93□□□□□ -1.94
IFT43Q96FT9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.93□□□□□ -1.94
IFT43Q96FT9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
IFT43Q96FT9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
IFT43Q96FT9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.93□□□□□ -1.94
IFT43Q96FT9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.93□□□□□ -1.94
IFT43Q96FT9 SNORD115-34-201ENST00000362441 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-12-201ENST00000362583 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-29-201ENST00000362834 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-9-201ENST00000362912 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-21-201ENST00000362963 81 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-14-201ENST00000363090 81 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 Y_RNA.107-201ENST00000363190 121 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-13-201ENST00000363358 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 RNU6-833P-201ENST00000363486 107 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-41-201ENST00000363608 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-11-201ENST00000363616 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-5-201ENST00000363633 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-39-201ENST00000363694 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-4-201ENST00000363810 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-16-201ENST00000363887 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-6-201ENST00000363942 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORA38-201ENST00000363946 132 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-42-201ENST00000364273 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-15-201ENST00000364809 81 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-1-201ENST00000364961 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-26-201ENST00000365067 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-10-201ENST00000365073 81 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-43-201ENST00000365503 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 SNORD115-36-201ENST00000365629 82 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 U8.16-201ENST00000391279 133 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 RNA5SP144-201ENST00000410846 116 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 AL135938.1-201ENST00000443141 297 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 RNA5SP356-201ENST00000515972 94 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 GTF3AP2-201ENST00000557014 266 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 MIR4672-201ENST00000583126 81 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
IFT43Q96FT9 AP006437.1-201ENST00000641440 3685 ntBASIC2.92□□□□□ -1.94
IFT43Q96FT9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
IFT43Q96FT9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
IFT43Q96FT9 AL442644.1-201ENST00000454390 3105 ntBASIC2.91□□□□□ -1.94
IFT43Q96FT9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
IFT43Q96FT9 Y_RNA.507-201ENST00000384500 99 ntBASIC2.91□□□□□ -1.94
IFT43Q96FT9 RNY1P7-201ENST00000384743 110 ntBASIC2.91□□□□□ -1.94
IFT43Q96FT9 MIR512-1-201ENST00000384913 84 ntBASIC2.91□□□□□ -1.94
IFT43Q96FT9 AC105272.1-201ENST00000438604 198 ntBASIC2.91□□□□□ -1.94
IFT43Q96FT9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.91□□□□□ -1.94
IFT43Q96FT9 RPL23AP94-201ENST00000512518 302 ntBASIC2.91□□□□□ -1.94
IFT43Q96FT9 RNA5SP168-201ENST00000516642 112 ntBASIC2.91□□□□□ -1.94
IFT43Q96FT9 MALAT1.1-201ENST00000618249 95 ntBASIC2.91□□□□□ -1.94
IFT43Q96FT9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
IFT43Q96FT9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
IFT43Q96FT9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms