Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LDLRP01130 MIR367-201ENST00000362299 68 ntBASIC1.71□□□□□ -2.14
LDLRP01130 RNU6-674P-201ENST00000363831 107 ntBASIC1.71□□□□□ -2.14
LDLRP01130 RNU6-271P-201ENST00000363858 105 ntBASIC1.71□□□□□ -2.14
LDLRP01130 Y_RNA.251-201ENST00000364551 99 ntBASIC1.71□□□□□ -2.14
LDLRP01130 Y_RNA.337-201ENST00000365312 102 ntBASIC1.71□□□□□ -2.14
LDLRP01130 MIR515-2-201ENST00000384883 83 ntBASIC1.71□□□□□ -2.14
LDLRP01130 MIR515-1-201ENST00000384884 83 ntBASIC1.71□□□□□ -2.14
LDLRP01130 AL627390.1-201ENST00000396055 340 ntBASIC1.71□□□□□ -2.14
LDLRP01130 RNU4-43P-201ENST00000410628 137 ntBASIC1.71□□□□□ -2.14
LDLRP01130 RN7SKP101-201ENST00000411376 320 ntBASIC1.71□□□□□ -2.14
LDLRP01130 RNU6-62P-201ENST00000516526 102 ntBASIC1.71□□□□□ -2.14
LDLRP01130 AC112693.2-201ENST00000556538 232 ntBASIC1.71□□□□□ -2.14
LDLRP01130 U6.108-201ENST00000637764 58 ntBASIC1.71□□□□□ -2.14
LDLRP01130 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
LDLRP01130 Y_RNA.71-201ENST00000362892 104 ntBASIC1.7□□□□□ -2.14
LDLRP01130 SNORD45.3-201ENST00000363836 72 ntBASIC1.7□□□□□ -2.14
LDLRP01130 SNORD48-201ENST00000364953 64 ntBASIC1.7□□□□□ -2.14
LDLRP01130 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.7□□□□□ -2.14
LDLRP01130 Y_RNA.420-201ENST00000384043 110 ntBASIC1.7□□□□□ -2.14
LDLRP01130 RNU6-296P-201ENST00000384608 107 ntBASIC1.7□□□□□ -2.14
LDLRP01130 RNU6-136P-201ENST00000384663 107 ntBASIC1.7□□□□□ -2.14
LDLRP01130 RNU6-376P-201ENST00000384731 106 ntBASIC1.7□□□□□ -2.14
LDLRP01130 MIR520A-201ENST00000384862 85 ntBASIC1.7□□□□□ -2.14
LDLRP01130 SNORA40-201ENST00000388090 126 ntBASIC1.7□□□□□ -2.14
LDLRP01130 SNORA67.5-201ENST00000391036 107 ntBASIC1.7□□□□□ -2.14
LDLRP01130 Y_RNA.622-201ENST00000411091 108 ntBASIC1.7□□□□□ -2.14
LDLRP01130 RPL30P13-201ENST00000418873 348 ntBASIC1.7□□□□□ -2.14
LDLRP01130 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
LDLRP01130 RNU6-437P-201ENST00000459408 95 ntBASIC1.7□□□□□ -2.14
LDLRP01130 RPL23AP54-201ENST00000495129 419 ntBASIC1.7□□□□□ -2.14
LDLRP01130 RNU6-313P-201ENST00000516317 112 ntBASIC1.7□□□□□ -2.14
LDLRP01130 RNU6-1234P-201ENST00000516877 103 ntBASIC1.7□□□□□ -2.14
LDLRP01130 RNU7-172P-201ENST00000517125 64 ntBASIC1.7□□□□□ -2.14
LDLRP01130 MIR4713-201ENST00000582691 75 ntBASIC1.7□□□□□ -2.14
LDLRP01130 AL929325.1-201ENST00000603096 117 ntBASIC1.7□□□□□ -2.14
LDLRP01130 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.7□□□□□ -2.14
LDLRP01130 AC006435.5-201ENST00000624486 112 ntBASIC1.7□□□□□ -2.14
LDLRP01130 RNU1-22P-201ENST00000363334 158 ntBASIC1.69□□□□□ -2.14
LDLRP01130 RNU6-1082P-201ENST00000364574 107 ntBASIC1.69□□□□□ -2.14
LDLRP01130 RNU6-728P-201ENST00000365375 104 ntBASIC1.69□□□□□ -2.14
LDLRP01130 RNU6-484P-201ENST00000384016 107 ntBASIC1.69□□□□□ -2.14
LDLRP01130 RNY3P5-201ENST00000384127 102 ntBASIC1.69□□□□□ -2.14
LDLRP01130 RNA5SP109-201ENST00000391010 116 ntBASIC1.69□□□□□ -2.14
LDLRP01130 RNU6-460P-201ENST00000391158 108 ntBASIC1.69□□□□□ -2.14
LDLRP01130 RNU6-588P-201ENST00000410281 105 ntBASIC1.69□□□□□ -2.14
LDLRP01130 RPS4XP11-201ENST00000446897 772 ntBASIC1.69□□□□□ -2.14
LDLRP01130 AC097462.1-201ENST00000514125 324 ntBASIC1.69□□□□□ -2.14
LDLRP01130 RNU7-99P-201ENST00000516271 62 ntBASIC1.69□□□□□ -2.14
LDLRP01130 RNU7-116P-201ENST00000516940 62 ntBASIC1.69□□□□□ -2.14
LDLRP01130 RNU7-128P-201ENST00000517247 62 ntBASIC1.69□□□□□ -2.14
LDLRP01130 AC024995.1-201ENST00000523014 93 ntBASIC1.69□□□□□ -2.14
LDLRP01130 AC073413.2-201ENST00000604332 360 ntBASIC1.69□□□□□ -2.14
LDLRP01130 AC084768.2-201ENST00000622736 221 ntBASIC1.69□□□□□ -2.14
LDLRP01130 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LDLRP01130 Y_RNA.127-201ENST00000363386 109 ntBASIC1.68□□□□□ -2.14
LDLRP01130 RNA5SP205-201ENST00000364653 136 ntBASIC1.68□□□□□ -2.14
LDLRP01130 RNU6-1336P-201ENST00000383886 109 ntBASIC1.68□□□□□ -2.14
LDLRP01130 MIR9-3-201ENST00000385084 90 ntBASIC1.68□□□□□ -2.14
LDLRP01130 Y_RNA.587-201ENST00000391210 103 ntBASIC1.68□□□□□ -2.14
LDLRP01130 MIR513C-201ENST00000401352 84 ntBASIC1.68□□□□□ -2.14
LDLRP01130 RNA5SP437-201ENST00000517249 129 ntBASIC1.68□□□□□ -2.14
LDLRP01130 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.68□□□□□ -2.14
LDLRP01130 DNAJC19P9-201ENST00000555084 351 ntBASIC1.68□□□□□ -2.14
LDLRP01130 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.68□□□□□ -2.14
LDLRP01130 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
LDLRP01130 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LDLRP01130 Y_RNA.81-201ENST00000362997 102 ntBASIC1.67□□□□□ -2.14
LDLRP01130 Y_RNA.224-201ENST00000364308 111 ntBASIC1.67□□□□□ -2.14
LDLRP01130 RNU6-978P-201ENST00000364371 103 ntBASIC1.67□□□□□ -2.14
LDLRP01130 Y_RNA.393-201ENST00000383936 102 ntBASIC1.67□□□□□ -2.14
LDLRP01130 SNORA72-201ENST00000384339 132 ntBASIC1.67□□□□□ -2.14
LDLRP01130 RNA5SP496-201ENST00000391240 109 ntBASIC1.67□□□□□ -2.14
LDLRP01130 HSPE1P9-201ENST00000440046 311 ntBASIC1.67□□□□□ -2.14
LDLRP01130 AC008267.6-201ENST00000441664 139 ntBASIC1.67□□□□□ -2.14
LDLRP01130 AL606517.2-201ENST00000442855 241 ntBASIC1.67□□□□□ -2.14
LDLRP01130 RNU6-1211P-201ENST00000459179 105 ntBASIC1.67□□□□□ -2.14
LDLRP01130 RNU6-1333P-201ENST00000516162 93 ntBASIC1.67□□□□□ -2.14
LDLRP01130 RNU6-250P-201ENST00000516958 103 ntBASIC1.67□□□□□ -2.14
LDLRP01130 AC022254.1-201ENST00000567857 235 ntBASIC1.67□□□□□ -2.14
LDLRP01130 MIR3646-201ENST00000578301 84 ntBASIC1.67□□□□□ -2.14
LDLRP01130 MIR4303-201ENST00000581299 66 ntBASIC1.67□□□□□ -2.14
LDLRP01130 AC120024.3-201ENST00000603167 156 ntBASIC1.67□□□□□ -2.14
LDLRP01130 MIR6844-201ENST00000637122 62 ntBASIC1.67□□□□□ -2.14
LDLRP01130 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
LDLRP01130 RNU6-199P-201ENST00000362954 107 ntBASIC1.66□□□□□ -2.14
LDLRP01130 RNU4-41P-201ENST00000364426 143 ntBASIC1.66□□□□□ -2.14
LDLRP01130 SNORD50B-201ENST00000364995 70 ntBASIC1.66□□□□□ -2.14
LDLRP01130 SNORA4.2-201ENST00000365313 147 ntBASIC1.66□□□□□ -2.14
LDLRP01130 RNU6-597P-201ENST00000365620 102 ntBASIC1.66□□□□□ -2.14
LDLRP01130 SNORD116-14-201ENST00000383894 92 ntBASIC1.66□□□□□ -2.14
LDLRP01130 SNORD116-17-201ENST00000383929 92 ntBASIC1.66□□□□□ -2.14
LDLRP01130 SNORD116-15-201ENST00000384445 92 ntBASIC1.66□□□□□ -2.14
LDLRP01130 SNORD20-201ENST00000384550 80 ntBASIC1.66□□□□□ -2.14
LDLRP01130 SNORD116-19-201ENST00000384729 92 ntBASIC1.66□□□□□ -2.14
LDLRP01130 SNORD37.2-201ENST00000391075 66 ntBASIC1.66□□□□□ -2.14
LDLRP01130 AC069257.2-201ENST00000441819 155 ntBASIC1.66□□□□□ -2.14
LDLRP01130 RPS27P1-201ENST00000450552 247 ntBASIC1.66□□□□□ -2.14
LDLRP01130 AC008834.1-201ENST00000511612 175 ntBASIC1.66□□□□□ -2.14
LDLRP01130 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms