Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MIR29C-201ENST00000385231 88 ntBASIC3.44□□□□□ -1.86
HOXA2O43364 RNA5SP261-201ENST00000410536 106 ntBASIC3.44□□□□□ -1.86
HOXA2O43364 CST9LP2-201ENST00000437612 320 ntBASIC3.44□□□□□ -1.86
HOXA2O43364 RNU7-45P-201ENST00000459460 63 ntBASIC3.44□□□□□ -1.86
HOXA2O43364 SNORA31.10-201ENST00000516482 106 ntBASIC3.44□□□□□ -1.86
HOXA2O43364 RNU6-1018P-201ENST00000516577 106 ntBASIC3.44□□□□□ -1.86
HOXA2O43364 Y_RNA.705-201ENST00000516862 110 ntBASIC3.44□□□□□ -1.86
HOXA2O43364 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXA2O43364 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.44□□□□□ -1.86
HOXA2O43364 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA2O43364 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA2O43364 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA2O43364 SNORA22.1-201ENST00000362701 134 ntBASIC3.43□□□□□ -1.86
HOXA2O43364 Y_RNA.510-201ENST00000384511 114 ntBASIC3.43□□□□□ -1.86
HOXA2O43364 SNORA44-201ENST00000384584 132 ntBASIC3.43□□□□□ -1.86
HOXA2O43364 RNA5SP225-201ENST00000410874 135 ntBASIC3.43□□□□□ -1.86
HOXA2O43364 RNA5SP492-201ENST00000411330 114 ntBASIC3.43□□□□□ -1.86
HOXA2O43364 AL353813.1-201ENST00000440700 253 ntBASIC3.43□□□□□ -1.86
HOXA2O43364 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA2O43364 RPS27P29-201ENST00000463110 252 ntBASIC3.43□□□□□ -1.86
HOXA2O43364 AC008885.1-201ENST00000514930 301 ntBASIC3.43□□□□□ -1.86
HOXA2O43364 RNA5SP33-201ENST00000516687 98 ntBASIC3.43□□□□□ -1.86
HOXA2O43364 MIR548Z-201ENST00000584743 97 ntBASIC3.43□□□□□ -1.86
HOXA2O43364 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA2O43364 MIR7106-201ENST00000612419 65 ntBASIC3.43□□□□□ -1.86
HOXA2O43364 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA2O43364 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA2O43364 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA2O43364 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA2O43364 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA2O43364 RNU1-58P-201ENST00000362413 163 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 Y_RNA.95-201ENST00000363079 95 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 RNU6-497P-201ENST00000365316 104 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 RNU6-1276P-201ENST00000365372 104 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 RNU6-1201P-201ENST00000384227 107 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 RNU6-616P-201ENST00000384353 107 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 SNORD116-22-201ENST00000384430 92 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 Y_RNA.500-201ENST00000384466 111 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 SNORD15B-201ENST00000384714 146 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 U8.16-201ENST00000391279 133 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 BTF3P4-201ENST00000418852 495 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA2O43364 MIR548AE2-201ENST00000583456 67 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 MIR4777-201ENST00000583710 86 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 UBL5P2-201ENST00000583788 219 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXA2O43364 AC096720.1-201ENST00000604441 183 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXA2O43364 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA2O43364 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA2O43364 AL365361.1-201ENST00000566942 3481 ntBASIC3.42□□□□□ -1.86
HOXA2O43364 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXA2O43364 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXA2O43364 SNORA80A-201ENST00000363922 136 ntBASIC3.41□□□□□ -1.86
HOXA2O43364 SNORA71.1-201ENST00000364523 117 ntBASIC3.41□□□□□ -1.86
HOXA2O43364 Y_RNA.370-201ENST00000365589 108 ntBASIC3.41□□□□□ -1.86
HOXA2O43364 MIR452-201ENST00000385020 85 ntBASIC3.41□□□□□ -1.86
HOXA2O43364 RN7SKP192-201ENST00000411291 327 ntBASIC3.41□□□□□ -1.86
HOXA2O43364 RNU7-67P-201ENST00000459003 62 ntBASIC3.41□□□□□ -1.86
HOXA2O43364 RNU7-12P-201ENST00000516030 62 ntBASIC3.41□□□□□ -1.86
HOXA2O43364 RNA5SP367-201ENST00000516557 118 ntBASIC3.41□□□□□ -1.86
HOXA2O43364 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.41□□□□□ -1.86
HOXA2O43364 AC091304.10-201ENST00000641554 121 ntBASIC3.41□□□□□ -1.86
HOXA2O43364 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
HOXA2O43364 Y_RNA.73-201ENST00000362910 113 ntBASIC3.4□□□□□ -1.87
HOXA2O43364 RNU6-675P-201ENST00000384236 104 ntBASIC3.4□□□□□ -1.87
HOXA2O43364 RNU6-972P-201ENST00000391208 107 ntBASIC3.4□□□□□ -1.87
HOXA2O43364 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.4□□□□□ -1.87
HOXA2O43364 MIR1255A-201ENST00000408338 113 ntBASIC3.4□□□□□ -1.87
HOXA2O43364 RNU6-887P-201ENST00000410660 100 ntBASIC3.4□□□□□ -1.87
HOXA2O43364 HSPE1P9-201ENST00000440046 311 ntBASIC3.4□□□□□ -1.87
HOXA2O43364 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXA2O43364 RNA5SP168-201ENST00000516642 112 ntBASIC3.4□□□□□ -1.87
HOXA2O43364 RNU6-1258P-201ENST00000516911 111 ntBASIC3.4□□□□□ -1.87
HOXA2O43364 DNAJC19P9-201ENST00000555084 351 ntBASIC3.4□□□□□ -1.87
HOXA2O43364 AC007336.1-201ENST00000576365 3828 ntBASIC3.4□□□□□ -1.87
HOXA2O43364 MIR6852-201ENST00000621699 66 ntBASIC3.4□□□□□ -1.87
HOXA2O43364 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXA2O43364 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HOXA2O43364 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXA2O43364 MIR5094-201ENST00000578766 85 ntBASIC3.39□□□□□ -1.87
HOXA2O43364 AC103810.6-201ENST00000606708 136 ntBASIC3.39□□□□□ -1.87
HOXA2O43364 AL137790.1-201ENST00000634283 177 ntBASIC3.39□□□□□ -1.87
HOXA2O43364 MIR6841-201ENST00000637129 72 ntBASIC3.39□□□□□ -1.87
HOXA2O43364 AL512310.12-203ENST00000640543 90 ntBASIC3.39□□□□□ -1.87
HOXA2O43364 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HOXA2O43364 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXA2O43364 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXA2O43364 Y_RNA.470-201ENST00000384307 117 ntBASIC3.38□□□□□ -1.87
HOXA2O43364 MIR516B2-201ENST00000385190 85 ntBASIC3.38□□□□□ -1.87
HOXA2O43364 RPS29P29-201ENST00000456396 171 ntBASIC3.38□□□□□ -1.87
HOXA2O43364 RNU6-521P-201ENST00000516663 105 ntBASIC3.38□□□□□ -1.87
HOXA2O43364 RNU6-958P-201ENST00000516995 106 ntBASIC3.38□□□□□ -1.87
HOXA2O43364 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.38□□□□□ -1.87
HOXA2O43364 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXA2O43364 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXA2O43364 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.37□□□□□ -1.87
HOXA2O43364 SNORA1.1-201ENST00000364671 133 ntBASIC3.37□□□□□ -1.87
HOXA2O43364 MIR136-201ENST00000385207 82 ntBASIC3.37□□□□□ -1.87
HOXA2O43364 RNU6-402P-201ENST00000410678 103 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms