Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RNU6-824P-201ENST00000363724 104 ntBASIC3.77□□□□□ -1.81
MS4A3Q96HJ5 RNA5SP175-201ENST00000364275 119 ntBASIC3.77□□□□□ -1.81
MS4A3Q96HJ5 SNORA11F-201ENST00000408237 128 ntBASIC3.77□□□□□ -1.81
MS4A3Q96HJ5 MIR1911-201ENST00000410783 80 ntBASIC3.77□□□□□ -1.81
MS4A3Q96HJ5 RNU6-711P-201ENST00000517255 106 ntBASIC3.77□□□□□ -1.81
MS4A3Q96HJ5 AL360157.1-201ENST00000565962 87 ntBASIC3.77□□□□□ -1.81
MS4A3Q96HJ5 AC021506.2-201ENST00000612354 169 ntBASIC3.77□□□□□ -1.81
MS4A3Q96HJ5 MIR4251-201ENST00000635819 61 ntBASIC3.77□□□□□ -1.81
MS4A3Q96HJ5 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.77□□□□□ -1.81
MS4A3Q96HJ5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
MS4A3Q96HJ5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
MS4A3Q96HJ5 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 RNA5SP295-201ENST00000362655 121 ntBASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 RNU6-446P-201ENST00000362827 106 ntBASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 SNORA25.5-201ENST00000363782 126 ntBASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 MIR520C-201ENST00000385005 87 ntBASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 AC011753.1-201ENST00000451001 220 ntBASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 RNU6-542P-201ENST00000516405 103 ntBASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 AC114781.5-201ENST00000615297 108 ntBASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
MS4A3Q96HJ5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
MS4A3Q96HJ5 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MS4A3Q96HJ5 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
MS4A3Q96HJ5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MS4A3Q96HJ5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MS4A3Q96HJ5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.75□□□□□ -1.81
MS4A3Q96HJ5 AC104389.3-201ENST00000445629 235 ntBASIC3.75□□□□□ -1.81
MS4A3Q96HJ5 RPS29P12-201ENST00000460178 152 ntBASIC3.75□□□□□ -1.81
MS4A3Q96HJ5 AC109327.1-201ENST00000471666 403 ntBASIC3.75□□□□□ -1.81
MS4A3Q96HJ5 RNU6-752P-201ENST00000516376 102 ntBASIC3.75□□□□□ -1.81
MS4A3Q96HJ5 RNU11-2P-201ENST00000516898 142 ntBASIC3.75□□□□□ -1.81
MS4A3Q96HJ5 DLEU2_3.2-201ENST00000612883 73 ntBASIC3.75□□□□□ -1.81
MS4A3Q96HJ5 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.75□□□□□ -1.81
MS4A3Q96HJ5 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 RNU1-58P-201ENST00000362413 163 ntBASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 RNU1-132P-201ENST00000364300 164 ntBASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 RNU6-1335P-201ENST00000365426 107 ntBASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 Y_RNA.510-201ENST00000384511 114 ntBASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 MIR563-201ENST00000385080 79 ntBASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 SNORD66.1-201ENST00000391230 76 ntBASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 ABCF2P2-201ENST00000450549 296 ntBASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 SCARNA4.1-201ENST00000628597 123 ntBASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.74□□□□□ -1.81
MS4A3Q96HJ5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 RNA5SP51-201ENST00000364750 119 ntBASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 RNU6-220P-201ENST00000390919 107 ntBASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 AL157831.1-201ENST00000426134 473 ntBASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 RN7SL594P-201ENST00000470590 287 ntBASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 RNA5SP49-201ENST00000516450 115 ntBASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 RNA5SP519-201ENST00000516480 119 ntBASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 RNA5SP309-201ENST00000516670 106 ntBASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 RNU6-1057P-201ENST00000517162 102 ntBASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 MIR3138-201ENST00000585238 82 ntBASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 TRDV1-202ENST00000621643 102 ntBASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 IPO8P1-201ENST00000455509 3109 ntBASIC3.73□□□□□ -1.81
MS4A3Q96HJ5 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 RNU6-664P-201ENST00000362381 107 ntBASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 RNU1-70P-201ENST00000362618 164 ntBASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 SNORA16B-201ENST00000364674 135 ntBASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 SNORA62-201ENST00000365493 153 ntBASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 HMGN2P35-201ENST00000412164 270 ntBASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 RN7SL691P-201ENST00000494487 301 ntBASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 MIR3939-201ENST00000582614 106 ntBASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 MIR6810-201ENST00000622701 70 ntBASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 MIR6830-201ENST00000636015 70 ntBASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
MS4A3Q96HJ5 AL161431.1-201ENST00000618966 4205 ntBASIC3.71□□□□□ -1.81
MS4A3Q96HJ5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
MS4A3Q96HJ5 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
MS4A3Q96HJ5 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MS4A3Q96HJ5 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms