Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SIX5Q8N196 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIX5Q8N196 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.08□□□□□ -1.92
SIX5Q8N196 Y_RNA.49-201ENST00000362714 112 ntBASIC3.08□□□□□ -1.92
SIX5Q8N196 RNY4P6-201ENST00000363667 96 ntBASIC3.08□□□□□ -1.92
SIX5Q8N196 RNU6-414P-201ENST00000363705 104 ntBASIC3.08□□□□□ -1.92
SIX5Q8N196 MIR196B-201ENST00000384852 84 ntBASIC3.08□□□□□ -1.92
SIX5Q8N196 MIR1302-5-201ENST00000408164 150 ntBASIC3.08□□□□□ -1.92
SIX5Q8N196 RNU2-7P-201ENST00000410794 178 ntBASIC3.08□□□□□ -1.92
SIX5Q8N196 RNU7-164P-201ENST00000459221 62 ntBASIC3.08□□□□□ -1.92
SIX5Q8N196 SNORA31.10-201ENST00000516482 106 ntBASIC3.08□□□□□ -1.92
SIX5Q8N196 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX5Q8N196 AC091932.4-201ENST00000623386 200 ntBASIC3.08□□□□□ -1.92
SIX5Q8N196 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.08□□□□□ -1.92
SIX5Q8N196 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX5Q8N196 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX5Q8N196 RNU6-1255P-201ENST00000363434 112 ntBASIC3.07□□□□□ -1.92
SIX5Q8N196 SNORA63.5-201ENST00000363548 123 ntBASIC3.07□□□□□ -1.92
SIX5Q8N196 RNU6-106P-201ENST00000384405 107 ntBASIC3.07□□□□□ -1.92
SIX5Q8N196 RNA5SP465-201ENST00000391195 109 ntBASIC3.07□□□□□ -1.92
SIX5Q8N196 AC087499.2-201ENST00000432861 149 ntBASIC3.07□□□□□ -1.92
SIX5Q8N196 HSPE1P9-201ENST00000440046 311 ntBASIC3.07□□□□□ -1.92
SIX5Q8N196 HMGN1P18-201ENST00000457642 277 ntBASIC3.07□□□□□ -1.92
SIX5Q8N196 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.07□□□□□ -1.92
SIX5Q8N196 SUMO2P16-201ENST00000519475 264 ntBASIC3.07□□□□□ -1.92
SIX5Q8N196 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX5Q8N196 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX5Q8N196 AC108206.1-201ENST00000570186 4159 ntBASIC3.07□□□□□ -1.92
SIX5Q8N196 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.06□□□□□ -1.92
SIX5Q8N196 Y_RNA.298-201ENST00000364960 107 ntBASIC3.06□□□□□ -1.92
SIX5Q8N196 Y_RNA.549-201ENST00000384657 102 ntBASIC3.06□□□□□ -1.92
SIX5Q8N196 AL035398.1-201ENST00000430869 322 ntBASIC3.06□□□□□ -1.92
SIX5Q8N196 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.06□□□□□ -1.92
SIX5Q8N196 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.06□□□□□ -1.92
SIX5Q8N196 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
SIX5Q8N196 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SIX5Q8N196 MIRLET7C-201ENST00000362160 84 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 MIR302B-201ENST00000362188 73 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 SNORA27-201ENST00000384323 126 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 RNU6-851P-201ENST00000384565 107 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 MIR181B1-201ENST00000385240 110 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 MIR887-201ENST00000401258 79 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 RNU6-554P-201ENST00000410466 106 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 AC015922.2-201ENST00000435593 184 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 RN7SL499P-201ENST00000481141 276 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 RNU6-237P-201ENST00000515985 71 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 RNU7-12P-201ENST00000516030 62 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 Y_RNA.677-201ENST00000516401 85 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 Y_RNA.694-201ENST00000516677 117 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 AC104027.1-201ENST00000521887 300 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 IGKV3-31-201ENST00000523109 329 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SIX5Q8N196 AC079600.2-201ENST00000550076 130 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 MIR4658-201ENST00000584344 65 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 AC009831.4-201ENST00000620744 325 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 AC106754.2-201ENST00000623006 233 ntBASIC3.05□□□□□ -1.92
SIX5Q8N196 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SIX5Q8N196 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.04□□□□□ -1.92
SIX5Q8N196 Y_RNA.163-201ENST00000363702 113 ntBASIC3.04□□□□□ -1.92
SIX5Q8N196 U8.16-201ENST00000391279 133 ntBASIC3.04□□□□□ -1.92
SIX5Q8N196 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX5Q8N196 HMGN2P3-201ENST00000433603 273 ntBASIC3.04□□□□□ -1.92
SIX5Q8N196 HMGN2P5-201ENST00000436882 273 ntBASIC3.04□□□□□ -1.92
SIX5Q8N196 SNORD109B-201ENST00000458961 67 ntBASIC3.04□□□□□ -1.92
SIX5Q8N196 SNORD109A-201ENST00000459128 67 ntBASIC3.04□□□□□ -1.92
SIX5Q8N196 RNU7-34P-201ENST00000459394 64 ntBASIC3.04□□□□□ -1.92
SIX5Q8N196 MIR4305-201ENST00000583252 102 ntBASIC3.04□□□□□ -1.92
SIX5Q8N196 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
SIX5Q8N196 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.03□□□□□ -1.92
SIX5Q8N196 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIX5Q8N196 RNU6-833P-201ENST00000363486 107 ntBASIC3.03□□□□□ -1.92
SIX5Q8N196 SNORA63D-201ENST00000364359 132 ntBASIC3.03□□□□□ -1.92
SIX5Q8N196 RNU4-16P-201ENST00000364737 141 ntBASIC3.03□□□□□ -1.92
SIX5Q8N196 MIR520A-201ENST00000384862 85 ntBASIC3.03□□□□□ -1.92
SIX5Q8N196 MIR518A2-201ENST00000384966 87 ntBASIC3.03□□□□□ -1.92
SIX5Q8N196 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX5Q8N196 RNU7-123P-201ENST00000515911 60 ntBASIC3.03□□□□□ -1.92
SIX5Q8N196 RNA5SP168-201ENST00000516642 112 ntBASIC3.03□□□□□ -1.92
SIX5Q8N196 AC090821.2-201ENST00000523552 176 ntBASIC3.03□□□□□ -1.92
SIX5Q8N196 AC107016.2-201ENST00000547968 190 ntBASIC3.03□□□□□ -1.92
SIX5Q8N196 AC078899.2-201ENST00000595282 212 ntBASIC3.03□□□□□ -1.92
SIX5Q8N196 AC006254.2-201ENST00000603259 279 ntBASIC3.03□□□□□ -1.92
SIX5Q8N196 AL035470.1-201ENST00000622571 220 ntBASIC3.03□□□□□ -1.92
SIX5Q8N196 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.03□□□□□ -1.92
SIX5Q8N196 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SIX5Q8N196 RNU6-756P-201ENST00000383997 107 ntBASIC3.02□□□□□ -1.93
SIX5Q8N196 SNORA70B-201ENST00000384210 135 ntBASIC3.02□□□□□ -1.93
SIX5Q8N196 MIR1267-201ENST00000408723 78 ntBASIC3.02□□□□□ -1.93
SIX5Q8N196 RNU7-96P-201ENST00000459535 64 ntBASIC3.02□□□□□ -1.93
SIX5Q8N196 AC107297.1-201ENST00000459991 176 ntBASIC3.02□□□□□ -1.93
SIX5Q8N196 RPL39P34-201ENST00000477141 156 ntBASIC3.02□□□□□ -1.93
SIX5Q8N196 AC008413.1-201ENST00000511864 177 ntBASIC3.02□□□□□ -1.93
SIX5Q8N196 RNU6-830P-201ENST00000516353 107 ntBASIC3.02□□□□□ -1.93
SIX5Q8N196 IGLV3-17-201ENST00000519099 244 ntBASIC3.02□□□□□ -1.93
SIX5Q8N196 AC002984.1-201ENST00000591692 448 ntBASIC3.02□□□□□ -1.93
SIX5Q8N196 MIR7843-201ENST00000622274 79 ntBASIC3.02□□□□□ -1.93
SIX5Q8N196 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SIX5Q8N196 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SIX5Q8N196 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SIX5Q8N196 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms