Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU6-1018P-201ENST00000516577 106 ntBASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 RNU7-28P-201ENST00000516759 62 ntBASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 RNU6-1116P-201ENST00000517269 99 ntBASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 AC090821.2-201ENST00000523552 176 ntBASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 AC019288.1-201ENST00000557918 224 ntBASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 MAPK10-322ENST00000641485 4530 ntBASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-34-201ENST00000362441 82 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-12-201ENST00000362583 82 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-29-201ENST00000362834 82 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-9-201ENST00000362912 82 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-21-201ENST00000362963 81 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-14-201ENST00000363090 81 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-41-201ENST00000363608 82 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-11-201ENST00000363616 82 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-5-201ENST00000363633 82 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-39-201ENST00000363694 82 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-4-201ENST00000363810 82 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-6-201ENST00000363942 82 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-42-201ENST00000364273 82 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-15-201ENST00000364809 81 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-26-201ENST00000365067 82 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-10-201ENST00000365073 81 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-43-201ENST00000365503 82 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-36-201ENST00000365629 82 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 Y_RNA.426-201ENST00000384068 113 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 RNU2-40P-201ENST00000410833 196 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 RNU7-45P-201ENST00000459460 63 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 AC023141.11-201ENST00000508864 202 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LYSMD3Q7Z3D4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 Y_RNA.99-201ENST00000363138 105 ntBASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 RNA5SP139-201ENST00000364340 117 ntBASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 SNORA68.1-201ENST00000364537 132 ntBASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 RNY1P4-201ENST00000384595 115 ntBASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 MIR128-1-201ENST00000384921 82 ntBASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 AL135938.1-201ENST00000443141 297 ntBASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 RN7SL504P-201ENST00000494496 287 ntBASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 RNU1-143P-201ENST00000516296 146 ntBASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 MIR5004-201ENST00000579078 107 ntBASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 U1.23-201ENST00000610293 146 ntBASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 RNU1-68P-201ENST00000615382 146 ntBASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 U1.39-201ENST00000621562 146 ntBASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 AC073476.4-201ENST00000628409 72 ntBASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.2□□□□□ -1.9
LYSMD3Q7Z3D4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 RNU6-163P-201ENST00000384396 106 ntBASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 MIR1270-201ENST00000459320 83 ntBASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 RN7SL863P-201ENST00000462370 296 ntBASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD59.2-201ENST00000516873 68 ntBASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 MIR4325-201ENST00000583049 90 ntBASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 MIR548AE2-201ENST00000583456 67 ntBASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 SNORA50A-202ENST00000629536 136 ntBASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 MIR4662A-201ENST00000637499 67 ntBASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 AC006160.2-201ENST00000637708 154 ntBASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 AC093831.2-201ENST00000624393 3427 ntBASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LYSMD3Q7Z3D4 AC245060.5-201ENST00000610778 3293 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-2-201ENST00000362842 82 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD115-20-201ENST00000365099 82 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 CD24P4-201ENST00000382840 243 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 Y_RNA.470-201ENST00000384307 117 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 RNU6-160P-201ENST00000384591 107 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 RNU6-1072P-201ENST00000384703 107 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 RNU6-443P-201ENST00000384780 107 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD77B-201ENST00000391112 67 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 AC069257.2-201ENST00000441819 155 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 SEM1P1-201ENST00000506694 209 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 RNU7-181P-201ENST00000517234 74 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 IGLV3-17-201ENST00000519099 244 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 SCARNA15.3-201ENST00000626315 122 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 SCARNA4.1-201ENST00000628597 123 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 AL512310.12-203ENST00000640543 90 ntBASIC3.18□□□□□ -1.9
LYSMD3Q7Z3D4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 Y_RNA.4-201ENST00000362333 112 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD116-10-201ENST00000363791 102 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 RNU6-776P-201ENST00000364403 104 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 RNU6-1022P-201ENST00000365049 104 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 SNORD58A-201ENST00000383875 65 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 RNU6-1319P-201ENST00000390855 104 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 RNU6-747P-201ENST00000390928 104 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 RNA5SP109-201ENST00000391010 116 ntBASIC3.17□□□□□ -1.9
LYSMD3Q7Z3D4 RNU6-241P-201ENST00000391148 104 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms