Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RNU6-1336P-201ENST00000383886 109 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 SNORA22C-201ENST00000384614 134 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 MIR583-201ENST00000384846 75 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 SNORA40-201ENST00000388090 126 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 SNORA48.3-201ENST00000391081 134 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 AL512604.1-201ENST00000404812 257 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 RNU2-51P-201ENST00000410708 197 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 RN7SKP101-201ENST00000411376 320 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 AC010154.1-201ENST00000425857 269 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 RPS27P1-201ENST00000450552 247 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 AC233266.1-201ENST00000454518 96 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 AC092991.1-201ENST00000477176 376 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 RNU6-62P-201ENST00000516526 102 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 RNA5SP437-201ENST00000517249 129 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 AC011604.1-201ENST00000545978 196 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 RPL23AP91-201ENST00000569211 455 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 AC091178.2-201ENST00000584401 117 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 AC242852.1-201ENST00000612151 96 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 AC244015.1-201ENST00000622301 99 ntBASIC2.16□□□□□ -2.06
SLC44A4Q53GD3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
SLC44A4Q53GD3 RNU6-1290P-201ENST00000362957 109 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 Y_RNA.203-201ENST00000364106 102 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 RNU6-1082P-201ENST00000364574 107 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 SNORA4.2-201ENST00000365313 147 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 Y_RNA.420-201ENST00000384043 110 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 RNY3P5-201ENST00000384127 102 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 RNU6-1154P-201ENST00000391001 104 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 RNU6-460P-201ENST00000391158 108 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 RNA5SP496-201ENST00000391240 109 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 RNU4-43P-201ENST00000410628 137 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 RNA5SP100-201ENST00000410903 110 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 RNA5SP59-201ENST00000410922 110 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 RNU7-197P-201ENST00000458836 62 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 RNU6-1211P-201ENST00000459179 105 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 AL021707.8-201ENST00000609428 183 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SLC44A4Q53GD3 ZNF355P-201ENST00000427301 3216 ntBASIC2.14□□□□□ -2.07
SLC44A4Q53GD3 Y_RNA.261-201ENST00000364631 102 ntBASIC2.14□□□□□ -2.07
SLC44A4Q53GD3 RNU6-1080P-201ENST00000383982 107 ntBASIC2.14□□□□□ -2.07
SLC44A4Q53GD3 RNU6-296P-201ENST00000384608 107 ntBASIC2.14□□□□□ -2.07
SLC44A4Q53GD3 AL356379.1-201ENST00000414105 126 ntBASIC2.14□□□□□ -2.07
SLC44A4Q53GD3 AC245047.3-201ENST00000429428 127 ntBASIC2.14□□□□□ -2.07
SLC44A4Q53GD3 RNA5SP57-201ENST00000459463 123 ntBASIC2.14□□□□□ -2.07
SLC44A4Q53GD3 RNA5SP182-201ENST00000516064 82 ntBASIC2.14□□□□□ -2.07
SLC44A4Q53GD3 RNU6-1234P-201ENST00000516877 103 ntBASIC2.14□□□□□ -2.07
SLC44A4Q53GD3 U1.36-201ENST00000620684 176 ntBASIC2.14□□□□□ -2.07
SLC44A4Q53GD3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.14□□□□□ -2.07
SLC44A4Q53GD3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SLC44A4Q53GD3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 RNU6-1209P-201ENST00000363655 107 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 Y_RNA.218-201ENST00000364218 104 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 Y_RNA.796-201ENST00000364268 102 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 Y_RNA.799-201ENST00000364992 102 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 Y_RNA.393-201ENST00000383936 102 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 RNU6-484P-201ENST00000384016 107 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 RNU6-1168P-201ENST00000390831 104 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 SNORA40.18-201ENST00000391200 128 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 RNA5SP338-201ENST00000410495 85 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 Y_RNA.621-201ENST00000411065 96 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 HSPE1P9-201ENST00000440046 311 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 RPL23AP63-201ENST00000498752 471 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 AC108729.3-201ENST00000513484 108 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 RNU6-313P-201ENST00000516317 112 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 RNU6-479P-201ENST00000516348 105 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 SNORA31.17-201ENST00000516953 127 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 MIR4498-201ENST00000577599 66 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 MIR378D2-201ENST00000580636 98 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 AC120024.3-201ENST00000603167 156 ntBASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.13□□□□□ -2.07
SLC44A4Q53GD3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SLC44A4Q53GD3 SNORA63D-201ENST00000364359 132 ntBASIC2.12□□□□□ -2.07
SLC44A4Q53GD3 RNU6-1053P-201ENST00000515930 101 ntBASIC2.12□□□□□ -2.07
SLC44A4Q53GD3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.12□□□□□ -2.07
SLC44A4Q53GD3 uc_338.4-201ENST00000616635 176 ntBASIC2.12□□□□□ -2.07
SLC44A4Q53GD3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 SNORA1B-201ENST00000362535 133 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 Y_RNA.71-201ENST00000362892 104 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 Y_RNA.432-201ENST00000384087 111 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 MIR520A-201ENST00000384862 85 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 MIR520G-201ENST00000385064 90 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 SNORA79-201ENST00000408376 140 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 RNU6-735P-201ENST00000410612 107 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 RNU2-7P-201ENST00000410794 178 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 SNORD11-201ENST00000459124 84 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 RNU6-1299P-201ENST00000516316 100 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 SNORA31.10-201ENST00000516482 106 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 RNU6-197P-201ENST00000516680 100 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 RNU2-56P-201ENST00000516826 190 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 RNU6-341P-201ENST00000516973 96 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 MIR3646-201ENST00000578301 84 ntBASIC2.11□□□□□ -2.07
SLC44A4Q53GD3 MIR4287-201ENST00000579398 78 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 238.4 ms