Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC008264.2-201ENST00000610193 3731 ntBASIC3.68□□□□□ -1.82
RNF40O75150 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF40O75150 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF40O75150 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF40O75150 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF40O75150 MIR148B-201ENST00000362252 99 ntBASIC3.68□□□□□ -1.82
RNF40O75150 SNORD56.3-201ENST00000363507 71 ntBASIC3.68□□□□□ -1.82
RNF40O75150 RNU6-524P-201ENST00000384270 107 ntBASIC3.68□□□□□ -1.82
RNF40O75150 SNORA11.2-201ENST00000408318 127 ntBASIC3.68□□□□□ -1.82
RNF40O75150 RPS12P2-201ENST00000439728 269 ntBASIC3.68□□□□□ -1.82
RNF40O75150 RNU6-667P-201ENST00000517186 102 ntBASIC3.68□□□□□ -1.82
RNF40O75150 RNU7-181P-201ENST00000517234 74 ntBASIC3.68□□□□□ -1.82
RNF40O75150 AC026333.2-201ENST00000542164 106 ntBASIC3.68□□□□□ -1.82
RNF40O75150 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF40O75150 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF40O75150 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF40O75150 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF40O75150 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF40O75150 RNA5SP383-201ENST00000362934 120 ntBASIC3.67□□□□□ -1.82
RNF40O75150 MIR634-201ENST00000385208 97 ntBASIC3.67□□□□□ -1.82
RNF40O75150 RNU6-1307P-201ENST00000391012 103 ntBASIC3.67□□□□□ -1.82
RNF40O75150 RNA5SP120-201ENST00000410900 112 ntBASIC3.67□□□□□ -1.82
RNF40O75150 AC005326.1-201ENST00000429197 123 ntBASIC3.67□□□□□ -1.82
RNF40O75150 AC115115.1-201ENST00000449927 248 ntBASIC3.67□□□□□ -1.82
RNF40O75150 AC025518.1-201ENST00000479856 347 ntBASIC3.67□□□□□ -1.82
RNF40O75150 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.67□□□□□ -1.82
RNF40O75150 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF40O75150 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF40O75150 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF40O75150 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF40O75150 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF40O75150 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF40O75150 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RNF40O75150 RNU4-35P-201ENST00000362588 141 ntBASIC3.66□□□□□ -1.82
RNF40O75150 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.66□□□□□ -1.82
RNF40O75150 MIR1267-201ENST00000408723 78 ntBASIC3.66□□□□□ -1.82
RNF40O75150 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF40O75150 AC015922.2-201ENST00000435593 184 ntBASIC3.66□□□□□ -1.82
RNF40O75150 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF40O75150 AL161932.1-201ENST00000437408 146 ntBASIC3.66□□□□□ -1.82
RNF40O75150 RNU2-27P-201ENST00000516185 142 ntBASIC3.66□□□□□ -1.82
RNF40O75150 RNU6-579P-201ENST00000516879 102 ntBASIC3.66□□□□□ -1.82
RNF40O75150 MIR7515-201ENST00000637837 67 ntBASIC3.66□□□□□ -1.82
RNF40O75150 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF40O75150 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF40O75150 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
RNF40O75150 RNU6-862P-201ENST00000362804 105 ntBASIC3.65□□□□□ -1.83
RNF40O75150 SNORD38.1-201ENST00000363863 68 ntBASIC3.65□□□□□ -1.83
RNF40O75150 SNORA24-201ENST00000384096 131 ntBASIC3.65□□□□□ -1.83
RNF40O75150 SNORA48.2-201ENST00000390926 124 ntBASIC3.65□□□□□ -1.83
RNF40O75150 RNU6-613P-201ENST00000410412 108 ntBASIC3.65□□□□□ -1.83
RNF40O75150 RNU7-34P-201ENST00000459394 64 ntBASIC3.65□□□□□ -1.83
RNF40O75150 RNA5SP380-201ENST00000517190 98 ntBASIC3.65□□□□□ -1.83
RNF40O75150 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
RNF40O75150 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF40O75150 RNU6-1190P-201ENST00000410811 104 ntBASIC3.64□□□□□ -1.83
RNF40O75150 SNORA59A-201ENST00000459326 152 ntBASIC3.64□□□□□ -1.83
RNF40O75150 UBL5P3-201ENST00000475112 231 ntBASIC3.64□□□□□ -1.83
RNF40O75150 AC092185.1-201ENST00000491371 97 ntBASIC3.64□□□□□ -1.83
RNF40O75150 RNU7-2P-201ENST00000516096 62 ntBASIC3.64□□□□□ -1.83
RNF40O75150 U4.6-201ENST00000621618 127 ntBASIC3.64□□□□□ -1.83
RNF40O75150 SNORA50A-202ENST00000629536 136 ntBASIC3.64□□□□□ -1.83
RNF40O75150 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RNF40O75150 RNU6-457P-201ENST00000363999 107 ntBASIC3.63□□□□□ -1.83
RNF40O75150 SNORA38.1-201ENST00000364172 131 ntBASIC3.63□□□□□ -1.83
RNF40O75150 SNORA68.1-201ENST00000364537 132 ntBASIC3.63□□□□□ -1.83
RNF40O75150 SNORA32-201ENST00000384072 121 ntBASIC3.63□□□□□ -1.83
RNF40O75150 RNU6-163P-201ENST00000384396 106 ntBASIC3.63□□□□□ -1.83
RNF40O75150 MIR128-1-201ENST00000384921 82 ntBASIC3.63□□□□□ -1.83
RNF40O75150 RN7SKP192-201ENST00000411291 327 ntBASIC3.63□□□□□ -1.83
RNF40O75150 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.63□□□□□ -1.83
RNF40O75150 STAG3L5P-204ENST00000443759 179 ntBASIC3.63□□□□□ -1.83
RNF40O75150 SNORA70.19-201ENST00000516717 90 ntBASIC3.63□□□□□ -1.83
RNF40O75150 AC140658.3-201ENST00000567603 271 ntBASIC3.63□□□□□ -1.83
RNF40O75150 MIR3152-201ENST00000579801 74 ntBASIC3.63□□□□□ -1.83
RNF40O75150 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF40O75150 AC093908.1-201ENST00000623125 8092 ntBASIC3.63□□□□□ -1.83
RNF40O75150 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF40O75150 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RNF40O75150 ICE2P2-201ENST00000483823 2787 ntBASIC3.62□□□□□ -1.83
RNF40O75150 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RNF40O75150 RNU6-424P-201ENST00000384367 105 ntBASIC3.62□□□□□ -1.83
RNF40O75150 RNA5SP109-201ENST00000391010 116 ntBASIC3.62□□□□□ -1.83
RNF40O75150 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.62□□□□□ -1.83
RNF40O75150 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF40O75150 AC004223.1-201ENST00000479840 271 ntBASIC3.62□□□□□ -1.83
RNF40O75150 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF40O75150 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF40O75150 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNF40O75150 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF40O75150 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF40O75150 RNU6-160P-201ENST00000384591 107 ntBASIC3.61□□□□□ -1.83
RNF40O75150 MIR206-201ENST00000384872 86 ntBASIC3.61□□□□□ -1.83
RNF40O75150 MIR591-201ENST00000385290 95 ntBASIC3.61□□□□□ -1.83
RNF40O75150 SNORD17-201ENST00000390930 237 ntBASIC3.61□□□□□ -1.83
RNF40O75150 RPL31P63-201ENST00000422565 375 ntBASIC3.61□□□□□ -1.83
RNF40O75150 CKS1BP2-201ENST00000497342 240 ntBASIC3.61□□□□□ -1.83
RNF40O75150 RNU6-523P-201ENST00000516304 54 ntBASIC3.61□□□□□ -1.83
RNF40O75150 AC245166.1-201ENST00000521012 253 ntBASIC3.61□□□□□ -1.83
RNF40O75150 AC020891.4-201ENST00000605745 93 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms