Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RNU2-34P-201ENST00000516534 121 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 RNU7-25P-201ENST00000516544 62 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 SNORD36C-201ENST00000516733 66 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.65□□□□□ -1.99
RFXAPO00287 MIR6733-201ENST00000635723 61 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 AC009487.4-201ENST00000624969 3585 ntBASIC2.65□□□□□ -1.99
RFXAPO00287 AC080128.1-201ENST00000474389 1917 ntBASIC2.64□□□□□ -1.99
RFXAPO00287 AC080100.1-201ENST00000624239 5356 ntBASIC2.64□□□□□ -1.99
RFXAPO00287 Y_RNA.298-201ENST00000364960 107 ntBASIC2.64□□□□□ -1.99
RFXAPO00287 AL359511.1-201ENST00000402970 211 ntBASIC2.64□□□□□ -1.99
RFXAPO00287 MIR548O-201ENST00000408583 114 ntBASIC2.64□□□□□ -1.99
RFXAPO00287 AC084364.2-201ENST00000546924 395 ntBASIC2.64□□□□□ -1.99
RFXAPO00287 AC021443.1-201ENST00000604478 211 ntBASIC2.64□□□□□ -1.99
RFXAPO00287 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.64□□□□□ -1.99
RFXAPO00287 AC110079.1-202ENST00000635213 138 ntBASIC2.64□□□□□ -1.99
RFXAPO00287 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RFXAPO00287 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RFXAPO00287 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RFXAPO00287 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RFXAPO00287 RNY4P6-201ENST00000363667 96 ntBASIC2.63□□□□□ -1.99
RFXAPO00287 Y_RNA.213-201ENST00000364178 111 ntBASIC2.63□□□□□ -1.99
RFXAPO00287 SNORA2.2-201ENST00000365473 135 ntBASIC2.63□□□□□ -1.99
RFXAPO00287 RNU6-1152P-201ENST00000384576 107 ntBASIC2.63□□□□□ -1.99
RFXAPO00287 RNU6-1077P-201ENST00000410506 102 ntBASIC2.63□□□□□ -1.99
RFXAPO00287 AC009238.1-201ENST00000442165 424 ntBASIC2.63□□□□□ -1.99
RFXAPO00287 PGBD4P5-201ENST00000445958 426 ntBASIC2.63□□□□□ -1.99
RFXAPO00287 AC009237.6-201ENST00000446969 424 ntBASIC2.63□□□□□ -1.99
RFXAPO00287 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.63□□□□□ -1.99
RFXAPO00287 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.63□□□□□ -1.99
RFXAPO00287 MIR3605-201ENST00000583214 100 ntBASIC2.63□□□□□ -1.99
RFXAPO00287 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.63□□□□□ -1.99
RFXAPO00287 Y_RNA.818-201ENST00000618813 71 ntBASIC2.63□□□□□ -1.99
RFXAPO00287 AC134878.1-201ENST00000619901 243 ntBASIC2.63□□□□□ -1.99
RFXAPO00287 UCA1.1-201ENST00000620952 75 ntBASIC2.63□□□□□ -1.99
RFXAPO00287 MIR6079-201ENST00000635807 62 ntBASIC2.63□□□□□ -1.99
RFXAPO00287 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RFXAPO00287 ZNF271P-202ENST00000465539 1970 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 AC002546.1-201ENST00000588041 2504 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 SNORA1B-201ENST00000362535 133 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 snoU2-30.2-201ENST00000362805 70 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 Y_RNA.332-201ENST00000365271 113 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 RNU6-546P-201ENST00000383991 107 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 RNU6-1083P-201ENST00000384022 107 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 MIR548D2-201ENST00000384955 97 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 MIR522-201ENST00000385071 87 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 RNU6-972P-201ENST00000391208 107 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 RNU2-48P-201ENST00000410694 191 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 RNU6-938P-201ENST00000411285 103 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 RNU7-164P-201ENST00000459221 62 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 AC107297.1-201ENST00000459991 176 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 AC093259.1-201ENST00000509755 300 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 RNU6-1041P-201ENST00000516254 102 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 RNU2-35P-201ENST00000516446 142 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 RNU6-158P-201ENST00000517104 100 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 AC026421.1-201ENST00000519101 163 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 AC004486.1-201ENST00000546846 233 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.62□□□□□ -1.99
RFXAPO00287 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.62□□□□□ -1.99
RFXAPO00287 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
RFXAPO00287 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RFXAPO00287 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
RFXAPO00287 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RFXAPO00287 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
RFXAPO00287 RNU6-228P-201ENST00000362700 106 ntBASIC2.61□□□□□ -1.99
RFXAPO00287 RNU4-16P-201ENST00000364737 141 ntBASIC2.61□□□□□ -1.99
RFXAPO00287 RNU6-1134P-201ENST00000365156 101 ntBASIC2.61□□□□□ -1.99
RFXAPO00287 MIR450A2-201ENST00000385022 100 ntBASIC2.61□□□□□ -1.99
RFXAPO00287 AC123900.1-201ENST00000420390 96 ntBASIC2.61□□□□□ -1.99
RFXAPO00287 MIR3199-1-201ENST00000582434 88 ntBASIC2.61□□□□□ -1.99
RFXAPO00287 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RFXAPO00287 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RFXAPO00287 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RFXAPO00287 RNU1-105P-201ENST00000363470 161 ntBASIC2.6□□□□□ -1.99
RFXAPO00287 Y_RNA.265-201ENST00000364677 108 ntBASIC2.6□□□□□ -1.99
RFXAPO00287 SNORD78.1-201ENST00000390866 65 ntBASIC2.6□□□□□ -1.99
RFXAPO00287 AC104332.2-201ENST00000429959 156 ntBASIC2.6□□□□□ -1.99
RFXAPO00287 RNU6-893P-201ENST00000458841 100 ntBASIC2.6□□□□□ -1.99
RFXAPO00287 RNU7-99P-201ENST00000516271 62 ntBASIC2.6□□□□□ -1.99
RFXAPO00287 RNU6-826P-201ENST00000516827 104 ntBASIC2.6□□□□□ -1.99
RFXAPO00287 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.6□□□□□ -1.99
RFXAPO00287 MIR548Z-201ENST00000584743 97 ntBASIC2.6□□□□□ -1.99
RFXAPO00287 MIR6873-201ENST00000622788 63 ntBASIC2.6□□□□□ -1.99
RFXAPO00287 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RFXAPO00287 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.59□□□□□ -1.99
RFXAPO00287 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.59□□□□□ -1.99
RFXAPO00287 MIR302B-201ENST00000362188 73 ntBASIC2.59□□□□□ -1.99
RFXAPO00287 Y_RNA.37-201ENST00000362606 108 ntBASIC2.59□□□□□ -1.99
RFXAPO00287 Y_RNA.78-201ENST00000362970 110 ntBASIC2.59□□□□□ -1.99
RFXAPO00287 Y_RNA.226-201ENST00000364337 114 ntBASIC2.59□□□□□ -1.99
RFXAPO00287 SNORA63D-201ENST00000364359 132 ntBASIC2.59□□□□□ -1.99
RFXAPO00287 SNORA14A-201ENST00000364773 135 ntBASIC2.59□□□□□ -1.99
RFXAPO00287 Y_RNA.290-201ENST00000364879 114 ntBASIC2.59□□□□□ -1.99
RFXAPO00287 Y_RNA.466-201ENST00000384294 113 ntBASIC2.59□□□□□ -1.99
RFXAPO00287 Y_RNA.547-201ENST00000384654 119 ntBASIC2.59□□□□□ -1.99
RFXAPO00287 U8.17-201ENST00000391292 132 ntBASIC2.59□□□□□ -1.99
RFXAPO00287 SNRPGP14-201ENST00000435400 219 ntBASIC2.59□□□□□ -1.99
RFXAPO00287 AL353689.1-201ENST00000438895 199 ntBASIC2.59□□□□□ -1.99
RFXAPO00287 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.59□□□□□ -1.99
RFXAPO00287 SNORA4.4-201ENST00000515921 135 ntBASIC2.59□□□□□ -1.99
RFXAPO00287 SNORA31.4-201ENST00000516049 129 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms