Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 AP001362.1-201ENST00000625165 124 ntBASIC4.43□□□□□ -1.7
SPDYE4A6NLX3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC4.43□□□□□ -1.7
SPDYE4A6NLX3 U6.98-201ENST00000637157 84 ntBASIC4.43□□□□□ -1.7
SPDYE4A6NLX3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPDYE4A6NLX3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPDYE4A6NLX3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPDYE4A6NLX3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPDYE4A6NLX3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 SNORA2B-201ENST00000384583 137 ntBASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 BX510359.4-201ENST00000423750 193 ntBASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 snoU13.22-201ENST00000459428 104 ntBASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 SCARNA16.3-201ENST00000516595 184 ntBASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 AL513423.1-201ENST00000621695 132 ntBASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 AL356274.2-201ENST00000624379 3752 ntBASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 MIR1289-1-201ENST00000408836 144 ntBASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 RNU7-153P-201ENST00000516455 62 ntBASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 AC244205.2-202ENST00000635781 342 ntBASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 RNU1-70P-201ENST00000362618 164 ntBASIC4.4□□□□□ -1.71
SPDYE4A6NLX3 SNORD46.1-201ENST00000364139 104 ntBASIC4.4□□□□□ -1.71
SPDYE4A6NLX3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SPDYE4A6NLX3 MIR1179-201ENST00000408703 91 ntBASIC4.4□□□□□ -1.71
SPDYE4A6NLX3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SPDYE4A6NLX3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.4□□□□□ -1.71
SPDYE4A6NLX3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 MIR660-201ENST00000385235 97 ntBASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 AC087499.7-201ENST00000441958 109 ntBASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 RNU7-170P-201ENST00000459303 61 ntBASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 AC006064.5-201ENST00000541782 248 ntBASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 AC244505.7-201ENST00000599675 272 ntBASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 SNORD14A-201ENST00000606526 91 ntBASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 RNA5SP246-201ENST00000458909 119 ntBASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 RPL29P14-201ENST00000495837 428 ntBASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 RN7SKP132-201ENST00000516001 208 ntBASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 CYP3A52P-201ENST00000563326 91 ntBASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 MIR7702-201ENST00000621931 59 ntBASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 Y_RNA.57-201ENST00000362806 113 ntBASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 RNU6-478P-201ENST00000363904 110 ntBASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 RNU2-7P-201ENST00000410794 178 ntBASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 SNORA74.3-201ENST00000517108 154 ntBASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 AC021506.2-201ENST00000612354 169 ntBASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 AC022202.1-201ENST00000613515 211 ntBASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 Y_RNA.333-201ENST00000365274 102 ntBASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 SNORA70.4-201ENST00000365509 134 ntBASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 MIR520A-201ENST00000384862 85 ntBASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 MIR7-3-201ENST00000384898 110 ntBASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 SNORA57.3-201ENST00000411095 141 ntBASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 AC004223.1-201ENST00000479840 271 ntBASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 RNU4-32P-201ENST00000363404 141 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 RNU6-283P-201ENST00000364788 107 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 RNU11-3P-201ENST00000391111 133 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 Z98742.3-201ENST00000418637 326 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 AC017083.1-201ENST00000428093 483 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 MIR4444-1-201ENST00000581696 74 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 MIR4444-2-201ENST00000584390 74 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 MIR8058-201ENST00000615737 89 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 RNA5SP133-201ENST00000363368 119 ntBASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 RNU6-624P-201ENST00000363411 107 ntBASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 SNORD35B-201ENST00000363660 87 ntBASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 MIR597-201ENST00000384968 97 ntBASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 AC025627.2-201ENST00000576220 160 ntBASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 MIR4709-201ENST00000577272 72 ntBASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SPDYE4A6NLX3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms