Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 AP001362.1-201ENST00000625165 124 ntBASIC4.43□□□□□ -1.7
SPDYE4A6NLX3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC4.43□□□□□ -1.7
SPDYE4A6NLX3 U6.98-201ENST00000637157 84 ntBASIC4.43□□□□□ -1.7
SPDYE4A6NLX3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPDYE4A6NLX3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPDYE4A6NLX3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPDYE4A6NLX3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPDYE4A6NLX3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 SNORA2B-201ENST00000384583 137 ntBASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 BX510359.4-201ENST00000423750 193 ntBASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 snoU13.22-201ENST00000459428 104 ntBASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 SCARNA16.3-201ENST00000516595 184 ntBASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 AL513423.1-201ENST00000621695 132 ntBASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SPDYE4A6NLX3 AL356274.2-201ENST00000624379 3752 ntBASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 MIR1289-1-201ENST00000408836 144 ntBASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 RNU7-153P-201ENST00000516455 62 ntBASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 AC244205.2-202ENST00000635781 342 ntBASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SPDYE4A6NLX3 RNU1-70P-201ENST00000362618 164 ntBASIC4.4□□□□□ -1.71
SPDYE4A6NLX3 SNORD46.1-201ENST00000364139 104 ntBASIC4.4□□□□□ -1.71
SPDYE4A6NLX3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SPDYE4A6NLX3 MIR1179-201ENST00000408703 91 ntBASIC4.4□□□□□ -1.71
SPDYE4A6NLX3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SPDYE4A6NLX3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.4□□□□□ -1.71
SPDYE4A6NLX3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 MIR660-201ENST00000385235 97 ntBASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 AC087499.7-201ENST00000441958 109 ntBASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 RNU7-170P-201ENST00000459303 61 ntBASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 AC006064.5-201ENST00000541782 248 ntBASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 AC244505.7-201ENST00000599675 272 ntBASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 SNORD14A-201ENST00000606526 91 ntBASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SPDYE4A6NLX3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 RNA5SP246-201ENST00000458909 119 ntBASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 RPL29P14-201ENST00000495837 428 ntBASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 RN7SKP132-201ENST00000516001 208 ntBASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 CYP3A52P-201ENST00000563326 91 ntBASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 MIR7702-201ENST00000621931 59 ntBASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SPDYE4A6NLX3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 Y_RNA.57-201ENST00000362806 113 ntBASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 RNU6-478P-201ENST00000363904 110 ntBASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 RNU2-7P-201ENST00000410794 178 ntBASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 SNORA74.3-201ENST00000517108 154 ntBASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 AC021506.2-201ENST00000612354 169 ntBASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 AC022202.1-201ENST00000613515 211 ntBASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SPDYE4A6NLX3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 Y_RNA.333-201ENST00000365274 102 ntBASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 SNORA70.4-201ENST00000365509 134 ntBASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 MIR520A-201ENST00000384862 85 ntBASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 MIR7-3-201ENST00000384898 110 ntBASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 SNORA57.3-201ENST00000411095 141 ntBASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 AC004223.1-201ENST00000479840 271 ntBASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.36□□□□□ -1.71
SPDYE4A6NLX3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 RNU4-32P-201ENST00000363404 141 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 RNU6-283P-201ENST00000364788 107 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 RNU11-3P-201ENST00000391111 133 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 Z98742.3-201ENST00000418637 326 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 AC017083.1-201ENST00000428093 483 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 MIR4444-1-201ENST00000581696 74 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 MIR4444-2-201ENST00000584390 74 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 MIR8058-201ENST00000615737 89 ntBASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.35□□□□□ -1.71
SPDYE4A6NLX3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 RNA5SP133-201ENST00000363368 119 ntBASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 RNU6-624P-201ENST00000363411 107 ntBASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 SNORD35B-201ENST00000363660 87 ntBASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 MIR597-201ENST00000384968 97 ntBASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 AC025627.2-201ENST00000576220 160 ntBASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 MIR4709-201ENST00000577272 72 ntBASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SPDYE4A6NLX3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SPDYE4A6NLX3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms