Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RNU6-161P-201ENST00000363051 106 ntBASIC3.72□□□□□ -1.81
VPS9D1Q9Y2B5 RNU6-800P-201ENST00000384473 103 ntBASIC3.72□□□□□ -1.81
VPS9D1Q9Y2B5 RNU6-296P-201ENST00000384608 107 ntBASIC3.72□□□□□ -1.81
VPS9D1Q9Y2B5 RNU6-1321P-201ENST00000390905 107 ntBASIC3.72□□□□□ -1.81
VPS9D1Q9Y2B5 RNU7-170P-201ENST00000459303 61 ntBASIC3.72□□□□□ -1.81
VPS9D1Q9Y2B5 RNA5SP208-201ENST00000516156 78 ntBASIC3.72□□□□□ -1.81
VPS9D1Q9Y2B5 SNORA48.11-201ENST00000517015 89 ntBASIC3.72□□□□□ -1.81
VPS9D1Q9Y2B5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS9D1Q9Y2B5 MIR7157-201ENST00000635801 60 ntBASIC3.72□□□□□ -1.81
VPS9D1Q9Y2B5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
VPS9D1Q9Y2B5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS9D1Q9Y2B5 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
VPS9D1Q9Y2B5 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 Y_RNA.98-201ENST00000363109 102 ntBASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 RNA5SP133-201ENST00000363368 119 ntBASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 SNORD114-6-201ENST00000364393 72 ntBASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 RNU6-913P-201ENST00000390913 95 ntBASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 SNORD30.1-201ENST00000391309 70 ntBASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 RHEBP3-201ENST00000411920 351 ntBASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 CST9LP2-201ENST00000437612 320 ntBASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 RNU6-807P-201ENST00000516805 107 ntBASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 RNU1-45P-201ENST00000517191 141 ntBASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 AP000553.6-201ENST00000641242 118 ntBASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS9D1Q9Y2B5 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 RNU6-862P-201ENST00000362804 105 ntBASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 Y_RNA.508-201ENST00000384502 114 ntBASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 RNU2-37P-201ENST00000410695 177 ntBASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 RNU6-1086P-201ENST00000410930 100 ntBASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 AC006989.1-201ENST00000427212 131 ntBASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 RNU7-48P-201ENST00000458875 63 ntBASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 SEM1P1-201ENST00000506694 209 ntBASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 FGF7P7-201ENST00000514120 227 ntBASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 SNORA67.7-201ENST00000516664 135 ntBASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 MIR5187-201ENST00000583479 76 ntBASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS9D1Q9Y2B5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 PWAR6-201ENST00000552334 4618 ntBASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 SNORD114-10-201ENST00000363409 72 ntBASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 RNA5SP171-201ENST00000391071 115 ntBASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 RNU6-602P-201ENST00000411155 105 ntBASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 AC006483.1-201ENST00000487308 313 ntBASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 AC110768.1-201ENST00000509222 400 ntBASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 MIR4796-201ENST00000580742 81 ntBASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 MIR3199-1-201ENST00000582434 88 ntBASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 MIR4484-201ENST00000582855 83 ntBASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 AL356280.1-201ENST00000603614 379 ntBASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 AC005000.2-201ENST00000605468 310 ntBASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 AC105081.1-201ENST00000617727 106 ntBASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 UCA1.1-201ENST00000620952 75 ntBASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 MIR1297-201ENST00000637311 77 ntBASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS9D1Q9Y2B5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 AL353746.1-201ENST00000566293 6881 ntBASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 RNU6-471P-201ENST00000383944 106 ntBASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 RNA5SP109-201ENST00000391010 116 ntBASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 RNU6-1108P-201ENST00000516308 104 ntBASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 SCARNA14-201ENST00000516903 136 ntBASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 AC087499.8-201ENST00000578406 226 ntBASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 MIR8054-201ENST00000620877 86 ntBASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 U6.111-201ENST00000636093 83 ntBASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS9D1Q9Y2B5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 AL021368.2-201ENST00000606125 5352 ntBASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 RNU6-833P-201ENST00000363486 107 ntBASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 MIR30B-201ENST00000384850 88 ntBASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 RNU6-1077P-201ENST00000410506 102 ntBASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 RNU6-1328P-201ENST00000410938 106 ntBASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 CYCSP35-201ENST00000451978 304 ntBASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 RNU7-79P-201ENST00000516082 62 ntBASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 RNU7-137P-201ENST00000516788 62 ntBASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 MIR3158-1-201ENST00000583596 81 ntBASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 AC243994.1-201ENST00000618627 109 ntBASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 AC245060.5-201ENST00000610778 3293 ntBASIC3.67□□□□□ -1.82
VPS9D1Q9Y2B5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms