Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 Y_RNA.714-201ENST00000517065 90 ntBASIC2.52□□□□□ -2.01
CLDND1Q9NY35 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDND1Q9NY35 AC007751.1-201ENST00000529260 376 ntBASIC2.52□□□□□ -2.01
CLDND1Q9NY35 U7.2-201ENST00000607576 63 ntBASIC2.52□□□□□ -2.01
CLDND1Q9NY35 AC011603.4-201ENST00000611325 277 ntBASIC2.52□□□□□ -2.01
CLDND1Q9NY35 MIR7111-201ENST00000619751 72 ntBASIC2.52□□□□□ -2.01
CLDND1Q9NY35 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.52□□□□□ -2.01
CLDND1Q9NY35 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CLDND1Q9NY35 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CLDND1Q9NY35 Y_RNA.127-201ENST00000363386 109 ntBASIC2.51□□□□□ -2.01
CLDND1Q9NY35 Y_RNA.140-201ENST00000363474 103 ntBASIC2.51□□□□□ -2.01
CLDND1Q9NY35 RNA5SP456-201ENST00000364002 114 ntBASIC2.51□□□□□ -2.01
CLDND1Q9NY35 AC245047.3-201ENST00000429428 127 ntBASIC2.51□□□□□ -2.01
CLDND1Q9NY35 RPL39P40-201ENST00000445481 146 ntBASIC2.51□□□□□ -2.01
CLDND1Q9NY35 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.51□□□□□ -2.01
CLDND1Q9NY35 RNU6-504P-201ENST00000516568 104 ntBASIC2.51□□□□□ -2.01
CLDND1Q9NY35 MIR4762-201ENST00000585261 75 ntBASIC2.51□□□□□ -2.01
CLDND1Q9NY35 MIR1291-201ENST00000627649 87 ntBASIC2.51□□□□□ -2.01
CLDND1Q9NY35 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.51□□□□□ -2.01
CLDND1Q9NY35 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLDND1Q9NY35 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CLDND1Q9NY35 U8.5-201ENST00000364528 136 ntBASIC2.5□□□□□ -2.01
CLDND1Q9NY35 SNORD116-14-201ENST00000383894 92 ntBASIC2.5□□□□□ -2.01
CLDND1Q9NY35 SNORD116-17-201ENST00000383929 92 ntBASIC2.5□□□□□ -2.01
CLDND1Q9NY35 SNORD116-15-201ENST00000384445 92 ntBASIC2.5□□□□□ -2.01
CLDND1Q9NY35 SNORD116-19-201ENST00000384729 92 ntBASIC2.5□□□□□ -2.01
CLDND1Q9NY35 MIR597-201ENST00000384968 97 ntBASIC2.5□□□□□ -2.01
CLDND1Q9NY35 RNA5SP109-201ENST00000391010 116 ntBASIC2.5□□□□□ -2.01
CLDND1Q9NY35 MIR1283-2-201ENST00000408621 87 ntBASIC2.5□□□□□ -2.01
CLDND1Q9NY35 RNU6-1234P-201ENST00000516877 103 ntBASIC2.5□□□□□ -2.01
CLDND1Q9NY35 AC131055.1-201ENST00000584626 316 ntBASIC2.5□□□□□ -2.01
CLDND1Q9NY35 AL365205.2-201ENST00000594586 68 ntBASIC2.5□□□□□ -2.01
CLDND1Q9NY35 AC069114.2-201ENST00000604699 304 ntBASIC2.5□□□□□ -2.01
CLDND1Q9NY35 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CLDND1Q9NY35 SNORD68-201ENST00000363214 84 ntBASIC2.49□□□□□ -2.01
CLDND1Q9NY35 RNU6-1019P-201ENST00000364424 107 ntBASIC2.49□□□□□ -2.01
CLDND1Q9NY35 Y_RNA.242-201ENST00000364473 110 ntBASIC2.49□□□□□ -2.01
CLDND1Q9NY35 Y_RNA.261-201ENST00000364631 102 ntBASIC2.49□□□□□ -2.01
CLDND1Q9NY35 SNORD24-201ENST00000383884 75 ntBASIC2.49□□□□□ -2.01
CLDND1Q9NY35 RNU1-109P-201ENST00000383960 147 ntBASIC2.49□□□□□ -2.01
CLDND1Q9NY35 RNU6-80P-201ENST00000384195 107 ntBASIC2.49□□□□□ -2.01
CLDND1Q9NY35 RNU11-3P-201ENST00000391111 133 ntBASIC2.49□□□□□ -2.01
CLDND1Q9NY35 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDND1Q9NY35 RNU6-1333P-201ENST00000516162 93 ntBASIC2.49□□□□□ -2.01
CLDND1Q9NY35 AC084364.2-201ENST00000546924 395 ntBASIC2.49□□□□□ -2.01
CLDND1Q9NY35 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.49□□□□□ -2.01
CLDND1Q9NY35 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.49□□□□□ -2.01
CLDND1Q9NY35 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
CLDND1Q9NY35 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLDND1Q9NY35 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.48□□□□□ -2.01
CLDND1Q9NY35 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLDND1Q9NY35 U8.1-201ENST00000362843 134 ntBASIC2.48□□□□□ -2.01
CLDND1Q9NY35 RNU6-1290P-201ENST00000362957 109 ntBASIC2.48□□□□□ -2.01
CLDND1Q9NY35 Y_RNA.120-201ENST00000363304 110 ntBASIC2.48□□□□□ -2.01
CLDND1Q9NY35 RNA5SP205-201ENST00000364653 136 ntBASIC2.48□□□□□ -2.01
CLDND1Q9NY35 SNORD61-201ENST00000384252 73 ntBASIC2.48□□□□□ -2.01
CLDND1Q9NY35 MIR518A2-201ENST00000384966 87 ntBASIC2.48□□□□□ -2.01
CLDND1Q9NY35 MIR624-201ENST00000385217 97 ntBASIC2.48□□□□□ -2.01
CLDND1Q9NY35 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDND1Q9NY35 Y_RNA.666-201ENST00000516187 112 ntBASIC2.48□□□□□ -2.01
CLDND1Q9NY35 MIR5094-201ENST00000578766 85 ntBASIC2.48□□□□□ -2.01
CLDND1Q9NY35 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.48□□□□□ -2.01
CLDND1Q9NY35 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.47□□□□□ -2.01
CLDND1Q9NY35 RNU6-888P-201ENST00000363010 101 ntBASIC2.47□□□□□ -2.01
CLDND1Q9NY35 SNORD50B-201ENST00000364995 70 ntBASIC2.47□□□□□ -2.01
CLDND1Q9NY35 SNORA1-201ENST00000384107 130 ntBASIC2.47□□□□□ -2.01
CLDND1Q9NY35 RNA5SP482-201ENST00000391269 118 ntBASIC2.47□□□□□ -2.01
CLDND1Q9NY35 RNU6-735P-201ENST00000410612 107 ntBASIC2.47□□□□□ -2.01
CLDND1Q9NY35 RNA5SP127-201ENST00000411051 133 ntBASIC2.47□□□□□ -2.01
CLDND1Q9NY35 SNORA18.4-201ENST00000516440 124 ntBASIC2.47□□□□□ -2.01
CLDND1Q9NY35 Y_RNA.686-201ENST00000516548 134 ntBASIC2.47□□□□□ -2.01
CLDND1Q9NY35 RNU7-28P-201ENST00000516759 62 ntBASIC2.47□□□□□ -2.01
CLDND1Q9NY35 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDND1Q9NY35 MIR8054-201ENST00000620877 86 ntBASIC2.47□□□□□ -2.01
CLDND1Q9NY35 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CLDND1Q9NY35 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CLDND1Q9NY35 Y_RNA.265-201ENST00000364677 108 ntBASIC2.46□□□□□ -2.02
CLDND1Q9NY35 U8.9-201ENST00000365667 134 ntBASIC2.46□□□□□ -2.02
CLDND1Q9NY35 SNORA64-201ENST00000384674 134 ntBASIC2.46□□□□□ -2.02
CLDND1Q9NY35 MIR548A2-201ENST00000384956 97 ntBASIC2.46□□□□□ -2.02
CLDND1Q9NY35 RNU6-440P-201ENST00000390882 105 ntBASIC2.46□□□□□ -2.02
CLDND1Q9NY35 RNA5SP465-201ENST00000391195 109 ntBASIC2.46□□□□□ -2.02
CLDND1Q9NY35 HMGN2P39-201ENST00000398005 273 ntBASIC2.46□□□□□ -2.02
CLDND1Q9NY35 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.46□□□□□ -2.02
CLDND1Q9NY35 RNU4-57P-201ENST00000515980 135 ntBASIC2.46□□□□□ -2.02
CLDND1Q9NY35 RNU6-1270P-201ENST00000517128 108 ntBASIC2.46□□□□□ -2.02
CLDND1Q9NY35 RNU2-60P-201ENST00000517290 128 ntBASIC2.46□□□□□ -2.02
CLDND1Q9NY35 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.46□□□□□ -2.02
CLDND1Q9NY35 MIR3129-201ENST00000581095 76 ntBASIC2.46□□□□□ -2.02
CLDND1Q9NY35 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CLDND1Q9NY35 Y_RNA.226-201ENST00000364337 114 ntBASIC2.45□□□□□ -2.02
CLDND1Q9NY35 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.45□□□□□ -2.02
CLDND1Q9NY35 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.45□□□□□ -2.02
CLDND1Q9NY35 SNRPGP13-201ENST00000442212 177 ntBASIC2.45□□□□□ -2.02
CLDND1Q9NY35 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.45□□□□□ -2.02
CLDND1Q9NY35 RNU1-104P-201ENST00000517280 175 ntBASIC2.45□□□□□ -2.02
CLDND1Q9NY35 MIR5092-201ENST00000583139 88 ntBASIC2.45□□□□□ -2.02
CLDND1Q9NY35 AC016717.2-201ENST00000609089 5141 ntBASIC2.45□□□□□ -2.02
CLDND1Q9NY35 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLDND1Q9NY35 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms