Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 Y_RNA.190-201ENST00000363964 101 ntBASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 Y_RNA.620-201ENST00000411009 88 ntBASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 AC092185.1-201ENST00000491371 97 ntBASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 RNU2-27P-201ENST00000516185 142 ntBASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 YPEL5P2-201ENST00000605553 359 ntBASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 Y_RNA.773-201ENST00000607168 90 ntBASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 AC064859.1-201ENST00000624741 174 ntBASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CUEDC1Q9NWM3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 SNORA1B-201ENST00000362535 133 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 RNU4-35P-201ENST00000362588 141 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 RNU1-91P-201ENST00000364746 163 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 MIR490-201ENST00000384865 128 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 MIR605-201ENST00000385078 83 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 RN7SKP200-201ENST00000410564 320 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 RNA5SP492-201ENST00000411330 114 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 AC005326.1-201ENST00000429197 123 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 RNU1-142P-201ENST00000516682 145 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 RNU6-267P-201ENST00000516714 103 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 RNU6-667P-201ENST00000517186 102 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 AC004812.1-201ENST00000540773 146 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 MIR4668-201ENST00000582284 70 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 MIR548Z-201ENST00000584743 97 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CUEDC1Q9NWM3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.34□□□□□ -1.87
CUEDC1Q9NWM3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CUEDC1Q9NWM3 RNU6-1084P-201ENST00000362498 107 ntBASIC3.34□□□□□ -1.87
CUEDC1Q9NWM3 SNORA25B-201ENST00000365507 128 ntBASIC3.34□□□□□ -1.87
CUEDC1Q9NWM3 SNORD17-201ENST00000390930 237 ntBASIC3.34□□□□□ -1.87
CUEDC1Q9NWM3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.34□□□□□ -1.87
CUEDC1Q9NWM3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.34□□□□□ -1.87
CUEDC1Q9NWM3 MIR4439-201ENST00000583746 80 ntBASIC3.34□□□□□ -1.87
CUEDC1Q9NWM3 AL353149.1-201ENST00000610667 244 ntBASIC3.34□□□□□ -1.87
CUEDC1Q9NWM3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CUEDC1Q9NWM3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CUEDC1Q9NWM3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CUEDC1Q9NWM3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.33□□□□□ -1.88
CUEDC1Q9NWM3 MIR340-201ENST00000362125 95 ntBASIC3.33□□□□□ -1.88
CUEDC1Q9NWM3 SNORD116-10-201ENST00000363791 102 ntBASIC3.33□□□□□ -1.88
CUEDC1Q9NWM3 RNU4-16P-201ENST00000364737 141 ntBASIC3.33□□□□□ -1.88
CUEDC1Q9NWM3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.33□□□□□ -1.88
CUEDC1Q9NWM3 AL353813.1-201ENST00000440700 253 ntBASIC3.33□□□□□ -1.88
CUEDC1Q9NWM3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CUEDC1Q9NWM3 HSPE1P19-201ENST00000603327 295 ntBASIC3.33□□□□□ -1.88
CUEDC1Q9NWM3 U6.108-201ENST00000637764 58 ntBASIC3.33□□□□□ -1.88
CUEDC1Q9NWM3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 SNORD68-201ENST00000363214 84 ntBASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 RNU6-679P-201ENST00000391003 106 ntBASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 AL357552.1-201ENST00000445254 415 ntBASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 MIR4325-201ENST00000583049 90 ntBASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 AC002984.1-201ENST00000591692 448 ntBASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 AC095038.3-201ENST00000634439 195 ntBASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 AC091304.10-201ENST00000641554 121 ntBASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CUEDC1Q9NWM3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 AC008264.2-201ENST00000610193 3731 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 MFSD8-233ENST00000641482 4860 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 RNU6-1201P-201ENST00000384227 107 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 RNU6-1072P-201ENST00000384703 107 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 RNU6-443P-201ENST00000384780 107 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 MIR515-2-201ENST00000384883 83 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 MIR515-1-201ENST00000384884 83 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 RNA5SP467-201ENST00000391274 118 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 RNU4-69P-201ENST00000410677 143 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 RNU2-40P-201ENST00000410833 196 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 AL512326.2-201ENST00000426359 151 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 RPL23AP63-201ENST00000498752 471 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 AC096720.1-201ENST00000604441 183 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 MIR338-201ENST00000636369 67 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 AC006160.2-201ENST00000637708 154 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.31□□□□□ -1.88
CUEDC1Q9NWM3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CUEDC1Q9NWM3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms