Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 RNU6-1123P-201ENST00000362347 106 ntBASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 RNU1-18P-201ENST00000363062 164 ntBASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 Y_RNA.174-201ENST00000363781 105 ntBASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 RNU1-59P-201ENST00000364829 162 ntBASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 RNA5SP95-201ENST00000410319 137 ntBASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 RNY3P8-201ENST00000411366 126 ntBASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 RNU7-193P-201ENST00000516723 65 ntBASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 SNORD95-201ENST00000579879 68 ntBASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 UBA3-213ENST00000631029 123 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP9-4Q9BYQ2 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP9-4Q9BYQ2 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP9-4Q9BYQ2 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP9-4Q9BYQ2 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
KRTAP9-4Q9BYQ2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP9-4Q9BYQ2 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.14
KRTAP9-4Q9BYQ2 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP9-4Q9BYQ2 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 RNA5SP242-201ENST00000364171 118 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 RNU4-52P-201ENST00000384209 138 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 SNORA25-201ENST00000384384 134 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 MIR1178-201ENST00000408396 91 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 RNU7-88P-201ENST00000458752 63 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 AC023424.1-201ENST00000496058 459 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 AC091912.1-201ENST00000511351 248 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 SNORA67.7-201ENST00000516664 135 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 SNORA31.14-201ENST00000516728 116 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 RNA5SP437-201ENST00000517249 129 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 IGLV2-28-201ENST00000520681 304 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 AP003716.2-201ENST00000528260 108 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 MIR4700-201ENST00000578311 74 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 MIR4311-201ENST00000580794 100 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 MIR1273E-201ENST00000581165 102 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 AC108676.2-201ENST00000605225 163 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 AC022202.1-201ENST00000613515 211 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 uc_338.16-201ENST00000621804 95 ntBASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP9-4Q9BYQ2 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 Y_RNA.32-201ENST00000362589 110 ntBASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 SNORA58B-201ENST00000364259 136 ntBASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 RNA5SP132-201ENST00000364725 118 ntBASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 RNA5SP30-201ENST00000365552 115 ntBASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 MIR551A-201ENST00000385042 96 ntBASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 MIR130A-201ENST00000385274 89 ntBASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 RNA5SP465-201ENST00000391195 109 ntBASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 SNORD83.1-201ENST00000411362 77 ntBASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 RNU7-26P-201ENST00000458980 63 ntBASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 snoU13.21-201ENST00000459368 105 ntBASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 RNA5SP497-201ENST00000516081 97 ntBASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 SNORA70.14-201ENST00000516205 110 ntBASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 MIR6773-201ENST00000612812 74 ntBASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP9-4Q9BYQ2 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 274.9 ms