Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RNU1-18P-201ENST00000363062 164 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 SNORA1.2-201ENST00000365189 134 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 RNU1-89P-201ENST00000384592 164 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 RNU6-1319P-201ENST00000390855 104 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 RNU6-747P-201ENST00000390928 104 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 SNORD77B-201ENST00000391112 67 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 RNU6-241P-201ENST00000391148 104 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 Z98941.1-201ENST00000407764 100 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 MIR1262-201ENST00000408276 93 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 RNA5SP261-201ENST00000410536 106 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 RNU6-177P-201ENST00000411257 104 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 AL159169.1-201ENST00000421119 127 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 AC022137.1-201ENST00000483735 151 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 RNA5SP356-201ENST00000515972 94 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 MIR3152-201ENST00000579801 74 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 Y_RNA.773-201ENST00000607168 90 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 MIR8054-201ENST00000620877 86 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 AC095038.3-201ENST00000634439 195 ntBASIC3.53□□□□□ -1.84
HLA-CQ95604 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-CQ95604 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-CQ95604 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-CQ95604 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-CQ95604 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
HLA-CQ95604 MIRLET7C-201ENST00000362160 84 ntBASIC3.52□□□□□ -1.85
HLA-CQ95604 RNU6-228P-201ENST00000362700 106 ntBASIC3.52□□□□□ -1.85
HLA-CQ95604 SNORA25.6-201ENST00000364121 118 ntBASIC3.52□□□□□ -1.85
HLA-CQ95604 RNU6-1124P-201ENST00000384169 107 ntBASIC3.52□□□□□ -1.85
HLA-CQ95604 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HLA-CQ95604 RNU6-644P-201ENST00000391155 98 ntBASIC3.52□□□□□ -1.85
HLA-CQ95604 RHEBP3-201ENST00000411920 351 ntBASIC3.52□□□□□ -1.85
HLA-CQ95604 RN7SL863P-201ENST00000462370 296 ntBASIC3.52□□□□□ -1.85
HLA-CQ95604 RN7SL594P-201ENST00000470590 287 ntBASIC3.52□□□□□ -1.85
HLA-CQ95604 RNA5SP367-201ENST00000516557 118 ntBASIC3.52□□□□□ -1.85
HLA-CQ95604 MIR4435-1-201ENST00000582552 80 ntBASIC3.52□□□□□ -1.85
HLA-CQ95604 MIR4439-201ENST00000583746 80 ntBASIC3.52□□□□□ -1.85
HLA-CQ95604 AC005786.1-201ENST00000588553 154 ntBASIC3.52□□□□□ -1.85
HLA-CQ95604 AC012531.4-201ENST00000616509 177 ntBASIC3.52□□□□□ -1.85
HLA-CQ95604 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.52□□□□□ -1.85
HLA-CQ95604 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-CQ95604 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HLA-CQ95604 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-CQ95604 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
HLA-CQ95604 AC092881.1-201ENST00000638218 2733 ntBASIC3.51□□□□□ -1.85
HLA-CQ95604 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-CQ95604 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-CQ95604 RNU6-833P-201ENST00000363486 107 ntBASIC3.51□□□□□ -1.85
HLA-CQ95604 RNU6-60P-201ENST00000364792 103 ntBASIC3.51□□□□□ -1.85
HLA-CQ95604 RNU6-950P-201ENST00000384651 107 ntBASIC3.51□□□□□ -1.85
HLA-CQ95604 MIR1267-201ENST00000408723 78 ntBASIC3.51□□□□□ -1.85
HLA-CQ95604 AL445687.1-201ENST00000439946 251 ntBASIC3.51□□□□□ -1.85
HLA-CQ95604 AL606517.2-201ENST00000442855 241 ntBASIC3.51□□□□□ -1.85
HLA-CQ95604 STAG3L5P-204ENST00000443759 179 ntBASIC3.51□□□□□ -1.85
HLA-CQ95604 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-CQ95604 RNU2-13P-201ENST00000515909 113 ntBASIC3.51□□□□□ -1.85
HLA-CQ95604 AC022254.1-201ENST00000567857 235 ntBASIC3.51□□□□□ -1.85
HLA-CQ95604 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HLA-CQ95604 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-CQ95604 RNU6-23P-201ENST00000363283 107 ntBASIC3.5□□□□□ -1.85
HLA-CQ95604 RPL32P35-201ENST00000415214 394 ntBASIC3.5□□□□□ -1.85
HLA-CQ95604 AC015922.2-201ENST00000435593 184 ntBASIC3.5□□□□□ -1.85
HLA-CQ95604 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.5□□□□□ -1.85
HLA-CQ95604 RPL39P39-201ENST00000455840 151 ntBASIC3.5□□□□□ -1.85
HLA-CQ95604 RNU7-113P-201ENST00000459273 62 ntBASIC3.5□□□□□ -1.85
HLA-CQ95604 RNU6-237P-201ENST00000515985 71 ntBASIC3.5□□□□□ -1.85
HLA-CQ95604 Y_RNA.705-201ENST00000516862 110 ntBASIC3.5□□□□□ -1.85
HLA-CQ95604 AC026271.5-201ENST00000577873 130 ntBASIC3.5□□□□□ -1.85
HLA-CQ95604 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.5□□□□□ -1.85
HLA-CQ95604 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-CQ95604 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
HLA-CQ95604 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-CQ95604 RNU6-1019P-201ENST00000364424 107 ntBASIC3.49□□□□□ -1.85
HLA-CQ95604 RNU6-1276P-201ENST00000365372 104 ntBASIC3.49□□□□□ -1.85
HLA-CQ95604 SNORD116-22-201ENST00000384430 92 ntBASIC3.49□□□□□ -1.85
HLA-CQ95604 RNU6-813P-201ENST00000384691 107 ntBASIC3.49□□□□□ -1.85
HLA-CQ95604 RNU6-972P-201ENST00000391208 107 ntBASIC3.49□□□□□ -1.85
HLA-CQ95604 UBL5P3-201ENST00000475112 231 ntBASIC3.49□□□□□ -1.85
HLA-CQ95604 SNORA31.4-201ENST00000516049 129 ntBASIC3.49□□□□□ -1.85
HLA-CQ95604 RNU6-795P-201ENST00000516323 103 ntBASIC3.49□□□□□ -1.85
HLA-CQ95604 GTF3AP2-201ENST00000557014 266 ntBASIC3.49□□□□□ -1.85
HLA-CQ95604 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-CQ95604 AC069114.2-201ENST00000604699 304 ntBASIC3.49□□□□□ -1.85
HLA-CQ95604 RNVU1-4-201ENST00000612985 164 ntBASIC3.49□□□□□ -1.85
HLA-CQ95604 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-CQ95604 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
HLA-CQ95604 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-CQ95604 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
HLA-CQ95604 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-CQ95604 Y_RNA.95-201ENST00000363079 95 ntBASIC3.48□□□□□ -1.85
HLA-CQ95604 MIR29C-201ENST00000385231 88 ntBASIC3.48□□□□□ -1.85
HLA-CQ95604 AL135938.1-201ENST00000443141 297 ntBASIC3.48□□□□□ -1.85
HLA-CQ95604 AC091826.1-201ENST00000514065 313 ntBASIC3.48□□□□□ -1.85
HLA-CQ95604 RNU7-53P-201ENST00000516705 60 ntBASIC3.48□□□□□ -1.85
HLA-CQ95604 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-CQ95604 AC093010.3-201ENST00000570269 15214 ntBASIC3.48□□□□□ -1.85
HLA-CQ95604 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-CQ95604 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-CQ95604 RNU6-461P-201ENST00000364195 107 ntBASIC3.47□□□□□ -1.85
HLA-CQ95604 MIR605-201ENST00000385078 83 ntBASIC3.47□□□□□ -1.85
HLA-CQ95604 RNU6-679P-201ENST00000391003 106 ntBASIC3.47□□□□□ -1.85
HLA-CQ95604 RNA5SP109-201ENST00000391010 116 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms