Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.29□□□□□ -1.88
LYSMD3Q7Z3D4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 RNA5SP383-201ENST00000362934 120 ntBASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 Y_RNA.95-201ENST00000363079 95 ntBASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 Y_RNA.96-201ENST00000363092 109 ntBASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 SNORD114-6-201ENST00000364393 72 ntBASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 MIR515-2-201ENST00000384883 83 ntBASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 MIR515-1-201ENST00000384884 83 ntBASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 MIR592-201ENST00000384959 97 ntBASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 MIR591-201ENST00000385290 95 ntBASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 RNA5SP229-201ENST00000410809 99 ntBASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 RNU6-998P-201ENST00000515894 101 ntBASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 RNU6-711P-201ENST00000517255 106 ntBASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 AC024995.1-201ENST00000523014 93 ntBASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LYSMD3Q7Z3D4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LYSMD3Q7Z3D4 Y_RNA.241-201ENST00000364470 117 ntBASIC3.27□□□□□ -1.89
LYSMD3Q7Z3D4 RNA5SP482-201ENST00000391269 118 ntBASIC3.27□□□□□ -1.89
LYSMD3Q7Z3D4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.27□□□□□ -1.89
LYSMD3Q7Z3D4 POLR2J4-204ENST00000418424 324 ntBASIC3.27□□□□□ -1.89
LYSMD3Q7Z3D4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.27□□□□□ -1.89
LYSMD3Q7Z3D4 RPL23AP63-201ENST00000498752 471 ntBASIC3.27□□□□□ -1.89
LYSMD3Q7Z3D4 Y_RNA.705-201ENST00000516862 110 ntBASIC3.27□□□□□ -1.89
LYSMD3Q7Z3D4 MIR8057-201ENST00000620957 69 ntBASIC3.27□□□□□ -1.89
LYSMD3Q7Z3D4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.27□□□□□ -1.89
LYSMD3Q7Z3D4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LYSMD3Q7Z3D4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.26□□□□□ -1.89
LYSMD3Q7Z3D4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.26□□□□□ -1.89
LYSMD3Q7Z3D4 Y_RNA.299-201ENST00000364973 94 ntBASIC3.26□□□□□ -1.89
LYSMD3Q7Z3D4 Y_RNA.377-201ENST00000365644 108 ntBASIC3.26□□□□□ -1.89
LYSMD3Q7Z3D4 Y_RNA.467-201ENST00000384297 102 ntBASIC3.26□□□□□ -1.89
LYSMD3Q7Z3D4 RNU6-887P-201ENST00000410660 100 ntBASIC3.26□□□□□ -1.89
LYSMD3Q7Z3D4 RNU4-69P-201ENST00000410677 143 ntBASIC3.26□□□□□ -1.89
LYSMD3Q7Z3D4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.26□□□□□ -1.89
LYSMD3Q7Z3D4 CST9LP2-201ENST00000437612 320 ntBASIC3.26□□□□□ -1.89
LYSMD3Q7Z3D4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.26□□□□□ -1.89
LYSMD3Q7Z3D4 Y_RNA.659-201ENST00000515994 113 ntBASIC3.26□□□□□ -1.89
LYSMD3Q7Z3D4 RNU6-667P-201ENST00000517186 102 ntBASIC3.26□□□□□ -1.89
LYSMD3Q7Z3D4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LYSMD3Q7Z3D4 AC092881.1-201ENST00000638218 2733 ntBASIC3.25□□□□□ -1.89
LYSMD3Q7Z3D4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LYSMD3Q7Z3D4 SNORD38C-201ENST00000384381 69 ntBASIC3.25□□□□□ -1.89
LYSMD3Q7Z3D4 Y_RNA.494-201ENST00000384432 111 ntBASIC3.25□□□□□ -1.89
LYSMD3Q7Z3D4 SRIP3-201ENST00000413200 219 ntBASIC3.25□□□□□ -1.89
LYSMD3Q7Z3D4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.25□□□□□ -1.89
LYSMD3Q7Z3D4 CST2P1-201ENST00000425770 87 ntBASIC3.25□□□□□ -1.89
LYSMD3Q7Z3D4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.25□□□□□ -1.89
LYSMD3Q7Z3D4 RNU7-96P-201ENST00000459535 64 ntBASIC3.25□□□□□ -1.89
LYSMD3Q7Z3D4 RN7SL636P-201ENST00000497504 294 ntBASIC3.25□□□□□ -1.89
LYSMD3Q7Z3D4 uc_338.25-201ENST00000613756 156 ntBASIC3.25□□□□□ -1.89
LYSMD3Q7Z3D4 MIR7112-201ENST00000616126 65 ntBASIC3.25□□□□□ -1.89
LYSMD3Q7Z3D4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.24□□□□□ -1.89
LYSMD3Q7Z3D4 RNU6-1201P-201ENST00000384227 107 ntBASIC3.24□□□□□ -1.89
LYSMD3Q7Z3D4 RNU6-24P-201ENST00000384440 107 ntBASIC3.24□□□□□ -1.89
LYSMD3Q7Z3D4 RNU2-63P-201ENST00000410792 194 ntBASIC3.24□□□□□ -1.89
LYSMD3Q7Z3D4 Y_RNA.620-201ENST00000411009 88 ntBASIC3.24□□□□□ -1.89
LYSMD3Q7Z3D4 AC114811.1-201ENST00000507207 168 ntBASIC3.24□□□□□ -1.89
LYSMD3Q7Z3D4 MIR5680-201ENST00000577577 84 ntBASIC3.24□□□□□ -1.89
LYSMD3Q7Z3D4 MIR4668-201ENST00000582284 70 ntBASIC3.24□□□□□ -1.89
LYSMD3Q7Z3D4 AL355297.2-201ENST00000604792 129 ntBASIC3.24□□□□□ -1.89
LYSMD3Q7Z3D4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.24□□□□□ -1.89
LYSMD3Q7Z3D4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LYSMD3Q7Z3D4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LYSMD3Q7Z3D4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 Y_RNA.171-201ENST00000363760 102 ntBASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 RNU6-616P-201ENST00000384353 107 ntBASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 SNORA48.2-201ENST00000390926 124 ntBASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 AL606517.2-201ENST00000442855 241 ntBASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 RN7SL297P-201ENST00000483161 293 ntBASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 AC018868.1-201ENST00000491307 315 ntBASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 RNU6-1258P-201ENST00000516911 111 ntBASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 AC245166.1-201ENST00000521012 253 ntBASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 MIR2682-201ENST00000580305 110 ntBASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 ZNF861P-201ENST00000588126 639 ntBASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
LYSMD3Q7Z3D4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 RNU6-862P-201ENST00000362804 105 ntBASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 SNORA25.6-201ENST00000364121 118 ntBASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 MIR561-201ENST00000385216 97 ntBASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 RNU4-47P-201ENST00000410876 114 ntBASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 AC245047.3-201ENST00000429428 127 ntBASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 AC115115.1-201ENST00000449927 248 ntBASIC3.22□□□□□ -1.89
LYSMD3Q7Z3D4 RNU7-113P-201ENST00000459273 62 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms