Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 Y_RNA.95-201ENST00000363079 95 ntBASIC3.31□□□□□ -1.88
FOXR1Q6PIV2 Y_RNA.242-201ENST00000364473 110 ntBASIC3.31□□□□□ -1.88
FOXR1Q6PIV2 SNORD38C-201ENST00000384381 69 ntBASIC3.31□□□□□ -1.88
FOXR1Q6PIV2 SNORA18-201ENST00000384416 132 ntBASIC3.31□□□□□ -1.88
FOXR1Q6PIV2 Y_RNA.494-201ENST00000384432 111 ntBASIC3.31□□□□□ -1.88
FOXR1Q6PIV2 RNY1P4-201ENST00000384595 115 ntBASIC3.31□□□□□ -1.88
FOXR1Q6PIV2 MIR218-1-201ENST00000384999 110 ntBASIC3.31□□□□□ -1.88
FOXR1Q6PIV2 RNU7-80P-201ENST00000459562 61 ntBASIC3.31□□□□□ -1.88
FOXR1Q6PIV2 MIR338-201ENST00000636369 67 ntBASIC3.31□□□□□ -1.88
FOXR1Q6PIV2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FOXR1Q6PIV2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXR1Q6PIV2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
FOXR1Q6PIV2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXR1Q6PIV2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
FOXR1Q6PIV2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXR1Q6PIV2 Y_RNA.4-201ENST00000362333 112 ntBASIC3.3□□□□□ -1.88
FOXR1Q6PIV2 MIR591-201ENST00000385290 95 ntBASIC3.3□□□□□ -1.88
FOXR1Q6PIV2 Y_RNA.611-201ENST00000410682 108 ntBASIC3.3□□□□□ -1.88
FOXR1Q6PIV2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXR1Q6PIV2 AC073261.1-201ENST00000429409 121 ntBASIC3.3□□□□□ -1.88
FOXR1Q6PIV2 AP004217.1-201ENST00000480579 346 ntBASIC3.3□□□□□ -1.88
FOXR1Q6PIV2 RN7SL499P-201ENST00000481141 276 ntBASIC3.3□□□□□ -1.88
FOXR1Q6PIV2 RPL23AP63-201ENST00000498752 471 ntBASIC3.3□□□□□ -1.88
FOXR1Q6PIV2 AL358944.1-201ENST00000528537 144 ntBASIC3.3□□□□□ -1.88
FOXR1Q6PIV2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXR1Q6PIV2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
FOXR1Q6PIV2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 RNU6-887P-201ENST00000410660 100 ntBASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 RNU2-48P-201ENST00000410694 191 ntBASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 COTL1P1-201ENST00000422309 375 ntBASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 AL109933.2-201ENST00000452651 260 ntBASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 MIR1270-201ENST00000459320 83 ntBASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 Y_RNA.659-201ENST00000515994 113 ntBASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 RNA5SP341-201ENST00000516261 117 ntBASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 RNU6-1018P-201ENST00000516577 106 ntBASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 SNORD45.4-201ENST00000516629 73 ntBASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 RNU6-1258P-201ENST00000516911 111 ntBASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 MIR4762-201ENST00000585261 75 ntBASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 MIR4662A-201ENST00000637499 67 ntBASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
FOXR1Q6PIV2 RNU1-70P-201ENST00000362618 164 ntBASIC3.28□□□□□ -1.88
FOXR1Q6PIV2 Y_RNA.171-201ENST00000363760 102 ntBASIC3.28□□□□□ -1.88
FOXR1Q6PIV2 Y_RNA.426-201ENST00000384068 113 ntBASIC3.28□□□□□ -1.88
FOXR1Q6PIV2 RNU6-616P-201ENST00000384353 107 ntBASIC3.28□□□□□ -1.88
FOXR1Q6PIV2 POLR2J4-204ENST00000418424 324 ntBASIC3.28□□□□□ -1.88
FOXR1Q6PIV2 CST9LP2-201ENST00000437612 320 ntBASIC3.28□□□□□ -1.88
FOXR1Q6PIV2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.28□□□□□ -1.88
FOXR1Q6PIV2 RNU7-45P-201ENST00000459460 63 ntBASIC3.28□□□□□ -1.88
FOXR1Q6PIV2 RPL23AP94-201ENST00000512518 302 ntBASIC3.28□□□□□ -1.88
FOXR1Q6PIV2 Y_RNA.705-201ENST00000516862 110 ntBASIC3.28□□□□□ -1.88
FOXR1Q6PIV2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.28□□□□□ -1.88
FOXR1Q6PIV2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.28□□□□□ -1.88
FOXR1Q6PIV2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.28□□□□□ -1.88
FOXR1Q6PIV2 Z83843.1-201ENST00000604070 3685 ntBASIC3.28□□□□□ -1.89
FOXR1Q6PIV2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
FOXR1Q6PIV2 SNORD45B-201ENST00000364617 72 ntBASIC3.27□□□□□ -1.89
FOXR1Q6PIV2 RNU6-1201P-201ENST00000384227 107 ntBASIC3.27□□□□□ -1.89
FOXR1Q6PIV2 Y_RNA.500-201ENST00000384466 111 ntBASIC3.27□□□□□ -1.89
FOXR1Q6PIV2 TRBV12-1-201ENST00000479785 344 ntBASIC3.27□□□□□ -1.89
FOXR1Q6PIV2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.27□□□□□ -1.89
FOXR1Q6PIV2 RNU1-142P-201ENST00000516682 145 ntBASIC3.27□□□□□ -1.89
FOXR1Q6PIV2 AP002004.2-201ENST00000531656 154 ntBASIC3.27□□□□□ -1.89
FOXR1Q6PIV2 AC007536.1-201ENST00000533382 349 ntBASIC3.27□□□□□ -1.89
FOXR1Q6PIV2 AC006111.3-201ENST00000622137 383 ntBASIC3.27□□□□□ -1.89
FOXR1Q6PIV2 MIR548BB-201ENST00000626714 66 ntBASIC3.27□□□□□ -1.89
FOXR1Q6PIV2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
FOXR1Q6PIV2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
FOXR1Q6PIV2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
FOXR1Q6PIV2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 AL355596.1-201ENST00000565399 3996 ntBASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 snoU2-30.1-201ENST00000365012 70 ntBASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 RNU6-1083P-201ENST00000384022 107 ntBASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 SNORA26.7-201ENST00000391288 122 ntBASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 AL035398.1-201ENST00000430869 322 ntBASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 AC069257.2-201ENST00000441819 155 ntBASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 MIR4778-201ENST00000577635 80 ntBASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 MIR4325-201ENST00000583049 90 ntBASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 ELOCP29-201ENST00000588193 334 ntBASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 AC021613.1-201ENST00000623880 111 ntBASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 GABRG2-229ENST00000641017 3628 ntBASIC3.26□□□□□ -1.89
FOXR1Q6PIV2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
FOXR1Q6PIV2 AC092881.1-201ENST00000638218 2733 ntBASIC3.25□□□□□ -1.89
FOXR1Q6PIV2 MFSD8-233ENST00000641482 4860 ntBASIC3.25□□□□□ -1.89
FOXR1Q6PIV2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FOXR1Q6PIV2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FOXR1Q6PIV2 U8.5-201ENST00000364528 136 ntBASIC3.25□□□□□ -1.89
FOXR1Q6PIV2 U8.9-201ENST00000365667 134 ntBASIC3.25□□□□□ -1.89
FOXR1Q6PIV2 SNORA80E-201ENST00000384744 137 ntBASIC3.25□□□□□ -1.89
FOXR1Q6PIV2 AL022718.1-201ENST00000412004 84 ntBASIC3.25□□□□□ -1.89
FOXR1Q6PIV2 AC107083.1-201ENST00000439643 279 ntBASIC3.25□□□□□ -1.89
FOXR1Q6PIV2 AC087499.4-201ENST00000448505 178 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 303.8 ms