Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 RNU2-40P-201ENST00000410833 196 ntBASIC3.46□□□□□ -1.86
PTCRAQ6ISU1 Y_RNA.620-201ENST00000411009 88 ntBASIC3.46□□□□□ -1.86
PTCRAQ6ISU1 AC073261.1-201ENST00000429409 121 ntBASIC3.46□□□□□ -1.86
PTCRAQ6ISU1 AC018868.1-201ENST00000491307 315 ntBASIC3.46□□□□□ -1.86
PTCRAQ6ISU1 GTF3AP2-201ENST00000557014 266 ntBASIC3.46□□□□□ -1.86
PTCRAQ6ISU1 MIR4644-201ENST00000579929 84 ntBASIC3.46□□□□□ -1.86
PTCRAQ6ISU1 MIR4668-201ENST00000582284 70 ntBASIC3.46□□□□□ -1.86
PTCRAQ6ISU1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PTCRAQ6ISU1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTCRAQ6ISU1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTCRAQ6ISU1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTCRAQ6ISU1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
PTCRAQ6ISU1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PTCRAQ6ISU1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTCRAQ6ISU1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTCRAQ6ISU1 RNU6-862P-201ENST00000362804 105 ntBASIC3.45□□□□□ -1.86
PTCRAQ6ISU1 UBL5P3-201ENST00000475112 231 ntBASIC3.45□□□□□ -1.86
PTCRAQ6ISU1 AC008885.1-201ENST00000514930 301 ntBASIC3.45□□□□□ -1.86
PTCRAQ6ISU1 RNU6-267P-201ENST00000516714 103 ntBASIC3.45□□□□□ -1.86
PTCRAQ6ISU1 AC090821.2-201ENST00000523552 176 ntBASIC3.45□□□□□ -1.86
PTCRAQ6ISU1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.45□□□□□ -1.86
PTCRAQ6ISU1 AC020914.4-201ENST00000597690 277 ntBASIC3.45□□□□□ -1.86
PTCRAQ6ISU1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
PTCRAQ6ISU1 AL442644.1-201ENST00000454390 3105 ntBASIC3.45□□□□□ -1.86
PTCRAQ6ISU1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PTCRAQ6ISU1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.45□□□□□ -1.86
PTCRAQ6ISU1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 ICE2P2-201ENST00000483823 2787 ntBASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 RNU6-1125P-201ENST00000363601 107 ntBASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 MIR1267-201ENST00000408723 78 ntBASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 RNA5SP261-201ENST00000410536 106 ntBASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 AL135938.1-201ENST00000443141 297 ntBASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 MIR4435-1-201ENST00000582552 80 ntBASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 AL512310.12-203ENST00000640543 90 ntBASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCRAQ6ISU1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 RNU6-1313P-201ENST00000362622 102 ntBASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 SNORA25.6-201ENST00000364121 118 ntBASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 SNORD58A-201ENST00000383875 65 ntBASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 RNU6-616P-201ENST00000384353 107 ntBASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 MIR486-1-201ENST00000612171 68 ntBASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
PTCRAQ6ISU1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 Y_RNA.171-201ENST00000363760 102 ntBASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 SNORA1.2-201ENST00000365189 134 ntBASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 SNORD6-201ENST00000365444 73 ntBASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 SNORA25B-201ENST00000365507 128 ntBASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 SNORA70.7-201ENST00000384159 133 ntBASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 Y_RNA.467-201ENST00000384297 102 ntBASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 RNU6-1072P-201ENST00000384703 107 ntBASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 RNU6-443P-201ENST00000384780 107 ntBASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 AC003685.2-201ENST00000422795 395 ntBASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 AC015922.2-201ENST00000435593 184 ntBASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTCRAQ6ISU1 AC091152.2-201ENST00000591628 2569 ntBASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 MAPK10-373ENST00000641983 6772 ntBASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 RNU4-82P-201ENST00000362443 140 ntBASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 Y_RNA.430-201ENST00000384081 110 ntBASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 Y_RNA.494-201ENST00000384432 111 ntBASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 SNORA11.4-201ENST00000408823 129 ntBASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 MIR2114-201ENST00000516645 80 ntBASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 RNA5SP33-201ENST00000516687 98 ntBASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 AC110741.2-201ENST00000605278 268 ntBASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.41□□□□□ -1.86
PTCRAQ6ISU1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
PTCRAQ6ISU1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PTCRAQ6ISU1 SNORA1.1-201ENST00000364671 133 ntBASIC3.4□□□□□ -1.87
PTCRAQ6ISU1 CD24P4-201ENST00000382840 243 ntBASIC3.4□□□□□ -1.87
PTCRAQ6ISU1 RNU6-237P-201ENST00000515985 71 ntBASIC3.4□□□□□ -1.87
PTCRAQ6ISU1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms