Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 MIR2276-201ENST00000516886 89 ntBASIC3.33□□□□□ -1.88
TMEM259Q4ZIN3 MIR4658-201ENST00000584344 65 ntBASIC3.33□□□□□ -1.88
TMEM259Q4ZIN3 AL035470.1-201ENST00000622571 220 ntBASIC3.33□□□□□ -1.88
TMEM259Q4ZIN3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
TMEM259Q4ZIN3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.32□□□□□ -1.88
TMEM259Q4ZIN3 RNU6-525P-201ENST00000363685 104 ntBASIC3.32□□□□□ -1.88
TMEM259Q4ZIN3 RNU6-294P-201ENST00000364999 102 ntBASIC3.32□□□□□ -1.88
TMEM259Q4ZIN3 MIR518A2-201ENST00000384966 87 ntBASIC3.32□□□□□ -1.88
TMEM259Q4ZIN3 RNA5SP465-201ENST00000391195 109 ntBASIC3.32□□□□□ -1.88
TMEM259Q4ZIN3 MIR1302-5-201ENST00000408164 150 ntBASIC3.32□□□□□ -1.88
TMEM259Q4ZIN3 MIR1283-2-201ENST00000408621 87 ntBASIC3.32□□□□□ -1.88
TMEM259Q4ZIN3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.32□□□□□ -1.88
TMEM259Q4ZIN3 MIR5004-201ENST00000579078 107 ntBASIC3.32□□□□□ -1.88
TMEM259Q4ZIN3 MIR4305-201ENST00000583252 102 ntBASIC3.32□□□□□ -1.88
TMEM259Q4ZIN3 AC009831.4-201ENST00000620744 325 ntBASIC3.32□□□□□ -1.88
TMEM259Q4ZIN3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM259Q4ZIN3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.32□□□□□ -1.88
TMEM259Q4ZIN3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 MIR302B-201ENST00000362188 73 ntBASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 RNU1-70P-201ENST00000362618 164 ntBASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 Y_RNA.49-201ENST00000362714 112 ntBASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 RNU6-833P-201ENST00000363486 107 ntBASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 RNY4P29-201ENST00000410801 97 ntBASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 Z92545.1-201ENST00000411782 234 ntBASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 RNU6-830P-201ENST00000516353 107 ntBASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 RPPH1-2P-201ENST00000516688 293 ntBASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 HSPE1P19-201ENST00000603327 295 ntBASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.31□□□□□ -1.88
TMEM259Q4ZIN3 SNORA63D-201ENST00000364359 132 ntBASIC3.3□□□□□ -1.88
TMEM259Q4ZIN3 RNU4-16P-201ENST00000364737 141 ntBASIC3.3□□□□□ -1.88
TMEM259Q4ZIN3 RNU6-756P-201ENST00000383997 107 ntBASIC3.3□□□□□ -1.88
TMEM259Q4ZIN3 MIR520A-201ENST00000384862 85 ntBASIC3.3□□□□□ -1.88
TMEM259Q4ZIN3 RPL23AP67-201ENST00000465341 474 ntBASIC3.3□□□□□ -1.88
TMEM259Q4ZIN3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.3□□□□□ -1.88
TMEM259Q4ZIN3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.3□□□□□ -1.88
TMEM259Q4ZIN3 AC096644.4-201ENST00000563417 2912 ntBASIC3.3□□□□□ -1.88
TMEM259Q4ZIN3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
TMEM259Q4ZIN3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 AP000648.3-201ENST00000623539 4507 ntBASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 MIR488-201ENST00000365739 83 ntBASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 RNU6-1014P-201ENST00000383940 103 ntBASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 RNU6-1031P-201ENST00000384773 107 ntBASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 MIR1267-201ENST00000408723 78 ntBASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 RNU4-47P-201ENST00000410876 114 ntBASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 RNA5SP344-201ENST00000411081 104 ntBASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 RNU7-181P-201ENST00000517234 74 ntBASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 AC078899.2-201ENST00000595282 212 ntBASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 AP001318.4-201ENST00000616637 121 ntBASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 AC073476.4-201ENST00000628409 72 ntBASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM259Q4ZIN3 AC017071.1-201ENST00000564407 2204 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 RNA5SP374-201ENST00000362939 125 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 Y_RNA.163-201ENST00000363702 113 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 Y_RNA.328-201ENST00000365208 113 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 Y_RNA.362-201ENST00000365518 110 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 SNORA51.5-201ENST00000384126 131 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 SNORA11.2-201ENST00000408318 127 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 AL035398.1-201ENST00000430869 322 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 RNU7-34P-201ENST00000459394 64 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 AC107297.1-201ENST00000459991 176 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 RNU7-123P-201ENST00000515911 60 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 RNU6-109P-201ENST00000516364 107 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 RNU6-184P-201ENST00000516514 107 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 SNORA31.26-201ENST00000517250 137 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 IGKV3-31-201ENST00000523109 329 ntBASIC3.28□□□□□ -1.88
TMEM259Q4ZIN3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
TMEM259Q4ZIN3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM259Q4ZIN3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
TMEM259Q4ZIN3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM259Q4ZIN3 RNY1P7-201ENST00000384743 110 ntBASIC3.27□□□□□ -1.89
TMEM259Q4ZIN3 MIR1302-4-201ENST00000408701 150 ntBASIC3.27□□□□□ -1.89
TMEM259Q4ZIN3 SNORA19.1-201ENST00000410656 129 ntBASIC3.27□□□□□ -1.89
TMEM259Q4ZIN3 RPL39P34-201ENST00000477141 156 ntBASIC3.27□□□□□ -1.89
TMEM259Q4ZIN3 IGLV3-17-201ENST00000519099 244 ntBASIC3.27□□□□□ -1.89
TMEM259Q4ZIN3 MIR3683-201ENST00000580847 82 ntBASIC3.27□□□□□ -1.89
TMEM259Q4ZIN3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.27□□□□□ -1.89
TMEM259Q4ZIN3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM259Q4ZIN3 AC093831.2-201ENST00000624393 3427 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-34-201ENST00000362441 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-12-201ENST00000362583 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-29-201ENST00000362834 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-9-201ENST00000362912 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-21-201ENST00000362963 81 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-14-201ENST00000363090 81 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-13-201ENST00000363358 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-41-201ENST00000363608 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-11-201ENST00000363616 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-5-201ENST00000363633 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-39-201ENST00000363694 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-4-201ENST00000363810 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-16-201ENST00000363887 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-6-201ENST00000363942 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-42-201ENST00000364273 82 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms