Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RNU6-616P-201ENST00000384353 107 ntBASIC3.19□□□□□ -1.9
RNF144AP50876 MIR23B-201ENST00000384832 97 ntBASIC3.19□□□□□ -1.9
RNF144AP50876 AC093578.1-201ENST00000415219 368 ntBASIC3.19□□□□□ -1.9
RNF144AP50876 AL135938.1-201ENST00000443141 297 ntBASIC3.19□□□□□ -1.9
RNF144AP50876 STAG3L5P-204ENST00000443759 179 ntBASIC3.19□□□□□ -1.9
RNF144AP50876 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.19□□□□□ -1.9
RNF144AP50876 RNU7-45P-201ENST00000459460 63 ntBASIC3.19□□□□□ -1.9
RNF144AP50876 RNU6-521P-201ENST00000516663 105 ntBASIC3.19□□□□□ -1.9
RNF144AP50876 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.19□□□□□ -1.9
RNF144AP50876 MIR4666B-201ENST00000578142 81 ntBASIC3.19□□□□□ -1.9
RNF144AP50876 AP003355.3-201ENST00000623465 114 ntBASIC3.19□□□□□ -1.9
RNF144AP50876 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RNF144AP50876 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF144AP50876 RNA5SP109-201ENST00000391010 116 ntBASIC3.18□□□□□ -1.9
RNF144AP50876 MIR1267-201ENST00000408723 78 ntBASIC3.18□□□□□ -1.9
RNF144AP50876 RPS29P4-201ENST00000414733 161 ntBASIC3.18□□□□□ -1.9
RNF144AP50876 RNU7-171P-201ENST00000459581 62 ntBASIC3.18□□□□□ -1.9
RNF144AP50876 UBL5P3-201ENST00000475112 231 ntBASIC3.18□□□□□ -1.9
RNF144AP50876 RNU6-1018P-201ENST00000516577 106 ntBASIC3.18□□□□□ -1.9
RNF144AP50876 SNORA70.19-201ENST00000516717 90 ntBASIC3.18□□□□□ -1.9
RNF144AP50876 IGLV3-17-201ENST00000519099 244 ntBASIC3.18□□□□□ -1.9
RNF144AP50876 AC019176.2-201ENST00000611579 315 ntBASIC3.18□□□□□ -1.9
RNF144AP50876 AL512310.12-203ENST00000640543 90 ntBASIC3.18□□□□□ -1.9
RNF144AP50876 AC009093.8-201ENST00000641769 292 ntBASIC3.18□□□□□ -1.9
RNF144AP50876 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNF144AP50876 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF144AP50876 RNU6-805P-201ENST00000365643 106 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 RNU6-1201P-201ENST00000384227 107 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 MIR490-201ENST00000384865 128 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 AC015922.2-201ENST00000435593 184 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF144AP50876 RPS27P29-201ENST00000463110 252 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 RN7SL594P-201ENST00000470590 287 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 RNU6-857P-201ENST00000515893 110 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 RNA5SP33-201ENST00000516687 98 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 MIR2276-201ENST00000516886 89 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 RNA5SP380-201ENST00000517190 98 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 RNU7-181P-201ENST00000517234 74 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 MIR4429-201ENST00000580105 73 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 AC096720.1-201ENST00000604441 183 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.17□□□□□ -1.9
RNF144AP50876 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF144AP50876 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RNF144AP50876 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNF144AP50876 RNU6-219P-201ENST00000364728 107 ntBASIC3.16□□□□□ -1.9
RNF144AP50876 MIR449B-201ENST00000384995 97 ntBASIC3.16□□□□□ -1.9
RNF144AP50876 SNORD17-201ENST00000390930 237 ntBASIC3.16□□□□□ -1.9
RNF144AP50876 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF144AP50876 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.16□□□□□ -1.9
RNF144AP50876 RNU6-1258P-201ENST00000516911 111 ntBASIC3.16□□□□□ -1.9
RNF144AP50876 MIR3152-201ENST00000579801 74 ntBASIC3.16□□□□□ -1.9
RNF144AP50876 MIR4444-1-201ENST00000581696 74 ntBASIC3.16□□□□□ -1.9
RNF144AP50876 MIR4444-2-201ENST00000584390 74 ntBASIC3.16□□□□□ -1.9
RNF144AP50876 AC008739.3-201ENST00000603262 127 ntBASIC3.16□□□□□ -1.9
RNF144AP50876 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.16□□□□□ -1.9
RNF144AP50876 SNORA28-201ENST00000606769 126 ntBASIC3.16□□□□□ -1.9
RNF144AP50876 MIR92B-201ENST00000607575 96 ntBASIC3.16□□□□□ -1.9
RNF144AP50876 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNF144AP50876 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNF144AP50876 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RNF144AP50876 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
RNF144AP50876 RNA5SP493-201ENST00000364115 91 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 Y_RNA.426-201ENST00000384068 113 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 MIR218-2-201ENST00000385006 110 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 RNU6-1319P-201ENST00000390855 104 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 RNU6-220P-201ENST00000390919 107 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 RNU6-747P-201ENST00000390928 104 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 RNU6-241P-201ENST00000391148 104 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 MIR1262-201ENST00000408276 93 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 RNA5SP293-201ENST00000410527 113 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 RNU6-177P-201ENST00000411257 104 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 Z92545.1-201ENST00000411782 234 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF144AP50876 AL049873.1-201ENST00000480540 376 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 AC026403.1-201ENST00000518938 295 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 MIR4668-201ENST00000582284 70 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 MIR6075-201ENST00000620782 95 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 MIR8054-201ENST00000620877 86 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 AC027279.3-201ENST00000625055 122 ntBASIC3.15□□□□□ -1.91
RNF144AP50876 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RNF144AP50876 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF144AP50876 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF144AP50876 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF144AP50876 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
RNF144AP50876 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RNF144AP50876 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF144AP50876 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF144AP50876 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF144AP50876 SNORD115-2-201ENST00000362842 82 ntBASIC3.14□□□□□ -1.91
RNF144AP50876 RNA5SP383-201ENST00000362934 120 ntBASIC3.14□□□□□ -1.91
RNF144AP50876 SNORD115-20-201ENST00000365099 82 ntBASIC3.14□□□□□ -1.91
RNF144AP50876 RNU6-24P-201ENST00000384440 107 ntBASIC3.14□□□□□ -1.91
RNF144AP50876 RNY1P4-201ENST00000384595 115 ntBASIC3.14□□□□□ -1.91
RNF144AP50876 RNU2-40P-201ENST00000410833 196 ntBASIC3.14□□□□□ -1.91
RNF144AP50876 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RNF144AP50876 AC003685.2-201ENST00000422795 395 ntBASIC3.14□□□□□ -1.91
RNF144AP50876 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF144AP50876 RPPH1-2P-201ENST00000516688 293 ntBASIC3.14□□□□□ -1.91
RNF144AP50876 MIR548AE2-201ENST00000583456 67 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms