Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 RNU2-63P-201ENST00000410792 194 ntBASIC3.94□□□□□ -1.78
PTPREP23469 AL161932.1-201ENST00000437408 146 ntBASIC3.94□□□□□ -1.78
PTPREP23469 AC004223.1-201ENST00000479840 271 ntBASIC3.94□□□□□ -1.78
PTPREP23469 AC090255.1-201ENST00000495779 349 ntBASIC3.94□□□□□ -1.78
PTPREP23469 AC114811.1-201ENST00000507207 168 ntBASIC3.94□□□□□ -1.78
PTPREP23469 NDUFB9P3-201ENST00000521269 501 ntBASIC3.94□□□□□ -1.78
PTPREP23469 AC024995.1-201ENST00000523014 93 ntBASIC3.94□□□□□ -1.78
PTPREP23469 MIR5004-201ENST00000579078 107 ntBASIC3.94□□□□□ -1.78
PTPREP23469 MIR4298-201ENST00000584380 73 ntBASIC3.94□□□□□ -1.78
PTPREP23469 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.94□□□□□ -1.78
PTPREP23469 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PTPREP23469 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
PTPREP23469 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.93□□□□□ -1.78
PTPREP23469 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.93□□□□□ -1.78
PTPREP23469 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PTPREP23469 RNU2-48P-201ENST00000410694 191 ntBASIC3.93□□□□□ -1.78
PTPREP23469 RPL31P63-201ENST00000422565 375 ntBASIC3.93□□□□□ -1.78
PTPREP23469 RNU7-34P-201ENST00000459394 64 ntBASIC3.93□□□□□ -1.78
PTPREP23469 UBL5P3-201ENST00000475112 231 ntBASIC3.93□□□□□ -1.78
PTPREP23469 SNORA31.1-201ENST00000515993 133 ntBASIC3.93□□□□□ -1.78
PTPREP23469 SNORA31.5-201ENST00000516190 133 ntBASIC3.93□□□□□ -1.78
PTPREP23469 IGLV3-17-201ENST00000519099 244 ntBASIC3.93□□□□□ -1.78
PTPREP23469 MIR3152-201ENST00000579801 74 ntBASIC3.93□□□□□ -1.78
PTPREP23469 MIR5739-201ENST00000619803 80 ntBASIC3.93□□□□□ -1.78
PTPREP23469 MIR6841-201ENST00000637129 72 ntBASIC3.93□□□□□ -1.78
PTPREP23469 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PTPREP23469 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTPREP23469 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
PTPREP23469 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
PTPREP23469 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.93□□□□□ -1.78
PTPREP23469 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTPREP23469 SNORD38.1-201ENST00000363863 68 ntBASIC3.92□□□□□ -1.78
PTPREP23469 MIR515-2-201ENST00000384883 83 ntBASIC3.92□□□□□ -1.78
PTPREP23469 MIR515-1-201ENST00000384884 83 ntBASIC3.92□□□□□ -1.78
PTPREP23469 AL445685.2-201ENST00000422551 342 ntBASIC3.92□□□□□ -1.78
PTPREP23469 RNU7-181P-201ENST00000517234 74 ntBASIC3.92□□□□□ -1.78
PTPREP23469 RNU6-1116P-201ENST00000517269 99 ntBASIC3.92□□□□□ -1.78
PTPREP23469 MIR4276-201ENST00000584832 70 ntBASIC3.92□□□□□ -1.78
PTPREP23469 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.92□□□□□ -1.78
PTPREP23469 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTPREP23469 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTPREP23469 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.91□□□□□ -1.78
PTPREP23469 RNU6-1244P-201ENST00000363614 108 ntBASIC3.91□□□□□ -1.78
PTPREP23469 FO393413.1-201ENST00000402892 195 ntBASIC3.91□□□□□ -1.78
PTPREP23469 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.91□□□□□ -1.78
PTPREP23469 MIR1267-201ENST00000408723 78 ntBASIC3.91□□□□□ -1.78
PTPREP23469 RNU6-1328P-201ENST00000410938 106 ntBASIC3.91□□□□□ -1.78
PTPREP23469 TRIAP1P1-201ENST00000427062 225 ntBASIC3.91□□□□□ -1.78
PTPREP23469 ATP5J2P3-201ENST00000451550 258 ntBASIC3.91□□□□□ -1.78
PTPREP23469 S100A11P2-201ENST00000467589 312 ntBASIC3.91□□□□□ -1.78
PTPREP23469 SCARNA11.3-201ENST00000517276 130 ntBASIC3.91□□□□□ -1.78
PTPREP23469 AC140658.3-201ENST00000567603 271 ntBASIC3.91□□□□□ -1.78
PTPREP23469 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTPREP23469 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
PTPREP23469 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PTPREP23469 RNU6-163P-201ENST00000384396 106 ntBASIC3.9□□□□□ -1.79
PTPREP23469 SRIP3-201ENST00000413200 219 ntBASIC3.9□□□□□ -1.79
PTPREP23469 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.9□□□□□ -1.79
PTPREP23469 CKS1BP2-201ENST00000497342 240 ntBASIC3.9□□□□□ -1.79
PTPREP23469 UCA1.1-201ENST00000620952 75 ntBASIC3.9□□□□□ -1.79
PTPREP23469 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.9□□□□□ -1.79
PTPREP23469 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PTPREP23469 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTPREP23469 RNU6-424P-201ENST00000384367 105 ntBASIC3.89□□□□□ -1.79
PTPREP23469 MIR95-201ENST00000385072 81 ntBASIC3.89□□□□□ -1.79
PTPREP23469 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PTPREP23469 RN7SKP192-201ENST00000411291 327 ntBASIC3.89□□□□□ -1.79
PTPREP23469 AC245047.3-201ENST00000429428 127 ntBASIC3.89□□□□□ -1.79
PTPREP23469 RN7SL297P-201ENST00000483161 293 ntBASIC3.89□□□□□ -1.79
PTPREP23469 RNU7-2P-201ENST00000516096 62 ntBASIC3.89□□□□□ -1.79
PTPREP23469 RNU7-28P-201ENST00000516759 62 ntBASIC3.89□□□□□ -1.79
PTPREP23469 EIF4BP1-201ENST00000554881 351 ntBASIC3.89□□□□□ -1.79
PTPREP23469 MIR3199-1-201ENST00000582434 88 ntBASIC3.89□□□□□ -1.79
PTPREP23469 MIR6852-201ENST00000621699 66 ntBASIC3.89□□□□□ -1.79
PTPREP23469 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPREP23469 RNU6-315P-201ENST00000362666 107 ntBASIC3.88□□□□□ -1.79
PTPREP23469 SNORD115-37-201ENST00000363768 82 ntBASIC3.88□□□□□ -1.79
PTPREP23469 RNU6-613P-201ENST00000410412 108 ntBASIC3.88□□□□□ -1.79
PTPREP23469 RNU6-1077P-201ENST00000410506 102 ntBASIC3.88□□□□□ -1.79
PTPREP23469 Z98742.3-201ENST00000418637 326 ntBASIC3.88□□□□□ -1.79
PTPREP23469 AL606517.2-201ENST00000442855 241 ntBASIC3.88□□□□□ -1.79
PTPREP23469 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.88□□□□□ -1.79
PTPREP23469 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPREP23469 AC093831.2-201ENST00000624393 3427 ntBASIC3.88□□□□□ -1.79
PTPREP23469 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPREP23469 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PTPREP23469 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PTPREP23469 CST2P1-201ENST00000425770 87 ntBASIC3.87□□□□□ -1.79
PTPREP23469 MICF-203ENST00000432679 129 ntBASIC3.87□□□□□ -1.79
PTPREP23469 RNU6-523P-201ENST00000516304 54 ntBASIC3.87□□□□□ -1.79
PTPREP23469 AL162274.2-201ENST00000614406 332 ntBASIC3.87□□□□□ -1.79
PTPREP23469 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTPREP23469 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.87□□□□□ -1.79
PTPREP23469 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PTPREP23469 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPREP23469 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
PTPREP23469 SNORD114-6-201ENST00000364393 72 ntBASIC3.86□□□□□ -1.79
PTPREP23469 Y_RNA.567-201ENST00000384736 106 ntBASIC3.86□□□□□ -1.79
PTPREP23469 RNU6-1307P-201ENST00000391012 103 ntBASIC3.86□□□□□ -1.79
PTPREP23469 SNORA26.6-201ENST00000391256 115 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms