Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPM3O75607 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPM3O75607 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.92□□□□□ -1.62
NPM3O75607 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NPM3O75607 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NPM3O75607 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
NPM3O75607 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NPM3O75607 AC244636.1-201ENST00000421152 228 ntBASIC4.91□□□□□ -1.62
NPM3O75607 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NPM3O75607 AC121758.2-201ENST00000553271 193 ntBASIC4.91□□□□□ -1.62
NPM3O75607 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.91□□□□□ -1.62
NPM3O75607 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NPM3O75607 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NPM3O75607 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
NPM3O75607 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NPM3O75607 AL161722.3-201ENST00000605789 2983 ntBASIC4.91□□□□□ -1.62
NPM3O75607 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
NPM3O75607 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
NPM3O75607 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NPM3O75607 RNU6-283P-201ENST00000364788 107 ntBASIC4.9□□□□□ -1.63
NPM3O75607 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NPM3O75607 RNU6ATAC42P-201ENST00000408637 95 ntBASIC4.9□□□□□ -1.63
NPM3O75607 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.9□□□□□ -1.63
NPM3O75607 SNORA84-201ENST00000459229 133 ntBASIC4.9□□□□□ -1.63
NPM3O75607 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPM3O75607 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPM3O75607 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPM3O75607 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPM3O75607 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NPM3O75607 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
NPM3O75607 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPM3O75607 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.89□□□□□ -1.63
NPM3O75607 Y_RNA.36-201ENST00000362602 112 ntBASIC4.89□□□□□ -1.63
NPM3O75607 RNU6-499P-201ENST00000365615 107 ntBASIC4.89□□□□□ -1.63
NPM3O75607 MIR516A2-201ENST00000384888 90 ntBASIC4.89□□□□□ -1.63
NPM3O75607 MIR516A1-201ENST00000385033 90 ntBASIC4.89□□□□□ -1.63
NPM3O75607 snoU13.2-201ENST00000459201 104 ntBASIC4.89□□□□□ -1.63
NPM3O75607 SNORA67.7-201ENST00000516664 135 ntBASIC4.89□□□□□ -1.63
NPM3O75607 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC4.89□□□□□ -1.63
NPM3O75607 AC022202.1-201ENST00000613515 211 ntBASIC4.89□□□□□ -1.63
NPM3O75607 AL138721.1-201ENST00000616756 179 ntBASIC4.89□□□□□ -1.63
NPM3O75607 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.88□□□□□ -1.63
NPM3O75607 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPM3O75607 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPM3O75607 RNU1-91P-201ENST00000364746 163 ntBASIC4.88□□□□□ -1.63
NPM3O75607 SNORD115-31-201ENST00000365318 82 ntBASIC4.88□□□□□ -1.63
NPM3O75607 ATP5A1P2-201ENST00000412323 255 ntBASIC4.88□□□□□ -1.63
NPM3O75607 AC245517.4-201ENST00000448601 281 ntBASIC4.88□□□□□ -1.63
NPM3O75607 RN7SL542P-201ENST00000467147 294 ntBASIC4.88□□□□□ -1.63
NPM3O75607 SUB1P4-201ENST00000566062 339 ntBASIC4.88□□□□□ -1.63
NPM3O75607 MIR4444-1-201ENST00000581696 74 ntBASIC4.88□□□□□ -1.63
NPM3O75607 MIR3158-1-201ENST00000583596 81 ntBASIC4.88□□□□□ -1.63
NPM3O75607 MIR4444-2-201ENST00000584390 74 ntBASIC4.88□□□□□ -1.63
NPM3O75607 MIR5684-201ENST00000585074 65 ntBASIC4.88□□□□□ -1.63
NPM3O75607 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPM3O75607 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.88□□□□□ -1.63
NPM3O75607 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPM3O75607 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.88□□□□□ -1.63
NPM3O75607 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.88□□□□□ -1.63
NPM3O75607 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
NPM3O75607 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NPM3O75607 RNA5SP465-201ENST00000391195 109 ntBASIC4.87□□□□□ -1.63
NPM3O75607 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NPM3O75607 AC104027.1-201ENST00000521887 300 ntBASIC4.87□□□□□ -1.63
NPM3O75607 MIR4472-2-201ENST00000582069 67 ntBASIC4.87□□□□□ -1.63
NPM3O75607 AL606490.9-201ENST00000603331 271 ntBASIC4.87□□□□□ -1.63
NPM3O75607 AC005520.4-201ENST00000604337 90 ntBASIC4.87□□□□□ -1.63
NPM3O75607 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPM3O75607 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
NPM3O75607 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPM3O75607 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.86□□□□□ -1.63
NPM3O75607 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
NPM3O75607 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
NPM3O75607 MIR518E-201ENST00000385252 88 ntBASIC4.86□□□□□ -1.63
NPM3O75607 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NPM3O75607 MIR942-201ENST00000401111 86 ntBASIC4.86□□□□□ -1.63
NPM3O75607 RNVU1-2-201ENST00000516326 135 ntBASIC4.86□□□□□ -1.63
NPM3O75607 MIR8058-201ENST00000615737 89 ntBASIC4.86□□□□□ -1.63
NPM3O75607 MIR7702-201ENST00000621931 59 ntBASIC4.86□□□□□ -1.63
NPM3O75607 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPM3O75607 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPM3O75607 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPM3O75607 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPM3O75607 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.85□□□□□ -1.63
NPM3O75607 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NPM3O75607 SNORA48.1-201ENST00000390879 135 ntBASIC4.85□□□□□ -1.63
NPM3O75607 UBL5P2-201ENST00000583788 219 ntBASIC4.85□□□□□ -1.63
NPM3O75607 SNORA4-201ENST00000584302 138 ntBASIC4.85□□□□□ -1.63
NPM3O75607 MIR6500-201ENST00000622700 86 ntBASIC4.85□□□□□ -1.63
NPM3O75607 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.85□□□□□ -1.63
NPM3O75607 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NPM3O75607 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.85□□□□□ -1.63
NPM3O75607 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NPM3O75607 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NPM3O75607 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
NPM3O75607 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.84□□□□□ -1.63
NPM3O75607 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPM3O75607 MIRLET7F1-201ENST00000362202 87 ntBASIC4.84□□□□□ -1.63
NPM3O75607 RPS29P7-201ENST00000439662 171 ntBASIC4.84□□□□□ -1.63
NPM3O75607 MIR6868-201ENST00000611215 58 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms