Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.17□□□□□ -2.06
PROM1O43490 U6.108-201ENST00000637764 58 ntBASIC2.17□□□□□ -2.06
PROM1O43490 RNA5SP37-201ENST00000365420 130 ntBASIC2.16□□□□□ -2.06
PROM1O43490 CYCSP49-201ENST00000420810 319 ntBASIC2.16□□□□□ -2.06
PROM1O43490 BX510359.4-201ENST00000423750 193 ntBASIC2.16□□□□□ -2.06
PROM1O43490 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.16□□□□□ -2.06
PROM1O43490 SNRPGP10-201ENST00000432323 225 ntBASIC2.16□□□□□ -2.06
PROM1O43490 HMGN1P7-201ENST00000491722 313 ntBASIC2.16□□□□□ -2.06
PROM1O43490 RNU6-341P-201ENST00000516973 96 ntBASIC2.16□□□□□ -2.06
PROM1O43490 MIR378D2-201ENST00000580636 98 ntBASIC2.16□□□□□ -2.06
PROM1O43490 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.16□□□□□ -2.06
PROM1O43490 Pinc.1-201ENST00000616452 154 ntBASIC2.16□□□□□ -2.06
PROM1O43490 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PROM1O43490 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PROM1O43490 Y_RNA.253-201ENST00000364562 112 ntBASIC2.15□□□□□ -2.07
PROM1O43490 Y_RNA.393-201ENST00000383936 102 ntBASIC2.15□□□□□ -2.07
PROM1O43490 RNU6-484P-201ENST00000384016 107 ntBASIC2.15□□□□□ -2.07
PROM1O43490 MIR518A2-201ENST00000384966 87 ntBASIC2.15□□□□□ -2.07
PROM1O43490 SNORA12.1-201ENST00000390873 148 ntBASIC2.15□□□□□ -2.07
PROM1O43490 SNORA11.4-201ENST00000408823 129 ntBASIC2.15□□□□□ -2.07
PROM1O43490 RNU2-55P-201ENST00000411146 174 ntBASIC2.15□□□□□ -2.07
PROM1O43490 HMGN2P3-201ENST00000433603 273 ntBASIC2.15□□□□□ -2.07
PROM1O43490 HMGN2P5-201ENST00000436882 273 ntBASIC2.15□□□□□ -2.07
PROM1O43490 RNU7-94P-201ENST00000459576 63 ntBASIC2.15□□□□□ -2.07
PROM1O43490 OR9P1P-201ENST00000496431 281 ntBASIC2.15□□□□□ -2.07
PROM1O43490 SNORD77.4-201ENST00000516158 81 ntBASIC2.15□□□□□ -2.07
PROM1O43490 RNA5SP281-201ENST00000516504 135 ntBASIC2.15□□□□□ -2.07
PROM1O43490 RNU7-149P-201ENST00000516739 59 ntBASIC2.15□□□□□ -2.07
PROM1O43490 RNU2-56P-201ENST00000516826 190 ntBASIC2.15□□□□□ -2.07
PROM1O43490 AC024995.1-201ENST00000523014 93 ntBASIC2.15□□□□□ -2.07
PROM1O43490 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.15□□□□□ -2.07
PROM1O43490 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PROM1O43490 AC131280.1-202ENST00000624067 4211 ntBASIC2.15□□□□□ -2.07
PROM1O43490 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PROM1O43490 AC010332.2-201ENST00000613083 1904 ntBASIC2.15□□□□□ -2.07
PROM1O43490 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
PROM1O43490 RNU1-58P-201ENST00000362413 163 ntBASIC2.14□□□□□ -2.07
PROM1O43490 MIR562-201ENST00000384894 95 ntBASIC2.14□□□□□ -2.07
PROM1O43490 RNU6-588P-201ENST00000410281 105 ntBASIC2.14□□□□□ -2.07
PROM1O43490 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.14□□□□□ -2.07
PROM1O43490 AC099677.2-201ENST00000436385 175 ntBASIC2.14□□□□□ -2.07
PROM1O43490 RNU6-548P-201ENST00000517083 115 ntBASIC2.14□□□□□ -2.07
PROM1O43490 MIR1273D-201ENST00000577266 86 ntBASIC2.14□□□□□ -2.07
PROM1O43490 AC022217.4-201ENST00000604389 163 ntBASIC2.14□□□□□ -2.07
PROM1O43490 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.14□□□□□ -2.07
PROM1O43490 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
PROM1O43490 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
PROM1O43490 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PROM1O43490 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.14□□□□□ -2.07
PROM1O43490 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PROM1O43490 MIR126-201ENST00000362291 85 ntBASIC2.13□□□□□ -2.07
PROM1O43490 SNORA1B-201ENST00000362535 133 ntBASIC2.13□□□□□ -2.07
PROM1O43490 Y_RNA.91-201ENST00000363042 107 ntBASIC2.13□□□□□ -2.07
PROM1O43490 RNA5SP99-201ENST00000364020 114 ntBASIC2.13□□□□□ -2.07
PROM1O43490 MIR597-201ENST00000384968 97 ntBASIC2.13□□□□□ -2.07
PROM1O43490 RNU11-3P-201ENST00000391111 133 ntBASIC2.13□□□□□ -2.07
PROM1O43490 SNORA75.5-201ENST00000391291 81 ntBASIC2.13□□□□□ -2.07
PROM1O43490 RNU6-257P-201ENST00000410238 98 ntBASIC2.13□□□□□ -2.07
PROM1O43490 RNA5SP450-201ENST00000411206 102 ntBASIC2.13□□□□□ -2.07
PROM1O43490 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.13□□□□□ -2.07
PROM1O43490 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.13□□□□□ -2.07
PROM1O43490 AL049830.1-201ENST00000468034 425 ntBASIC2.13□□□□□ -2.07
PROM1O43490 RPS26P45-201ENST00000471748 340 ntBASIC2.13□□□□□ -2.07
PROM1O43490 AP002004.2-201ENST00000531656 154 ntBASIC2.13□□□□□ -2.07
PROM1O43490 MIR3646-201ENST00000578301 84 ntBASIC2.13□□□□□ -2.07
PROM1O43490 MIR4287-201ENST00000579398 78 ntBASIC2.13□□□□□ -2.07
PROM1O43490 AC005786.1-201ENST00000588553 154 ntBASIC2.13□□□□□ -2.07
PROM1O43490 AC120024.3-201ENST00000603167 156 ntBASIC2.13□□□□□ -2.07
PROM1O43490 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.13□□□□□ -2.07
PROM1O43490 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.13□□□□□ -2.07
PROM1O43490 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PROM1O43490 ICE2P2-201ENST00000483823 2787 ntBASIC2.12□□□□□ -2.07
PROM1O43490 SNORD114-1-201ENST00000362705 72 ntBASIC2.12□□□□□ -2.07
PROM1O43490 SNORD68-201ENST00000363214 84 ntBASIC2.12□□□□□ -2.07
PROM1O43490 RNU6-81P-201ENST00000365608 104 ntBASIC2.12□□□□□ -2.07
PROM1O43490 RNU6-1336P-201ENST00000383886 109 ntBASIC2.12□□□□□ -2.07
PROM1O43490 Y_RNA.420-201ENST00000384043 110 ntBASIC2.12□□□□□ -2.07
PROM1O43490 SNORA40-201ENST00000388090 126 ntBASIC2.12□□□□□ -2.07
PROM1O43490 MIR802-201ENST00000390235 94 ntBASIC2.12□□□□□ -2.07
PROM1O43490 Y_RNA.586-201ENST00000391146 98 ntBASIC2.12□□□□□ -2.07
PROM1O43490 SNORA26-201ENST00000391286 122 ntBASIC2.12□□□□□ -2.07
PROM1O43490 AC245047.3-201ENST00000429428 127 ntBASIC2.12□□□□□ -2.07
PROM1O43490 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PROM1O43490 AC090255.1-201ENST00000495779 349 ntBASIC2.12□□□□□ -2.07
PROM1O43490 MIR514B-201ENST00000516774 80 ntBASIC2.12□□□□□ -2.07
PROM1O43490 AC090142.3-201ENST00000519012 385 ntBASIC2.12□□□□□ -2.07
PROM1O43490 AL627230.6-201ENST00000611129 280 ntBASIC2.12□□□□□ -2.07
PROM1O43490 AL591926.4-201ENST00000616895 298 ntBASIC2.12□□□□□ -2.07
PROM1O43490 AC009831.4-201ENST00000620744 325 ntBASIC2.12□□□□□ -2.07
PROM1O43490 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PROM1O43490 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PROM1O43490 SNORA25.7-201ENST00000364375 127 ntBASIC2.11□□□□□ -2.07
PROM1O43490 RNU6-1082P-201ENST00000364574 107 ntBASIC2.11□□□□□ -2.07
PROM1O43490 Y_RNA.634-201ENST00000364811 113 ntBASIC2.11□□□□□ -2.07
PROM1O43490 RNU6-1117P-201ENST00000384525 104 ntBASIC2.11□□□□□ -2.07
PROM1O43490 MIR221-201ENST00000385135 110 ntBASIC2.11□□□□□ -2.07
PROM1O43490 SNORA48.3-201ENST00000391081 134 ntBASIC2.11□□□□□ -2.07
PROM1O43490 RNU6-460P-201ENST00000391158 108 ntBASIC2.11□□□□□ -2.07
PROM1O43490 MIR548I2-201ENST00000408348 149 ntBASIC2.11□□□□□ -2.07
PROM1O43490 AL158823.1-201ENST00000418441 478 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms