Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RNU1-52P-201ENST00000384190 164 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 Y_RNA.563-201ENST00000384707 108 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 MIR524-201ENST00000385242 87 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 AL606845.1-201ENST00000404881 255 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 MIR1302-4-201ENST00000408701 150 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 MIR1278-201ENST00000408753 81 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.43□□□□□ -2.02
SALL3Q9BXA9 AL121914.1-201ENST00000450188 156 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 AC245047.8-201ENST00000456455 284 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 AC010531.2-201ENST00000465012 153 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 RNA5SP20-201ENST00000515976 84 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 RNU6-638P-201ENST00000516582 104 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 RNU6-1007P-201ENST00000516586 107 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 Y_RNA.709-201ENST00000516952 92 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 POLR3GP1-201ENST00000594073 261 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 MIR5739-201ENST00000619803 80 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 AC068647.2-201ENST00000637380 353 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.43□□□□□ -2.02
SALL3Q9BXA9 WWP1P1-201ENST00000466609 2769 ntBASIC2.43□□□□□ -2.02
SALL3Q9BXA9 SNORD114-1-201ENST00000362705 72 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 Y_RNA.309-201ENST00000365046 111 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 RNA5SP138-201ENST00000365098 114 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 RNU6-1240P-201ENST00000365155 104 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 RNU6-643P-201ENST00000384018 107 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 Y_RNA.542-201ENST00000384641 111 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 SNORA40-201ENST00000388090 126 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 MIR513C-201ENST00000401352 84 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 MIR1287-201ENST00000408492 90 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.42□□□□□ -2.02
SALL3Q9BXA9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.42□□□□□ -2.02
SALL3Q9BXA9 HMGN2P18-201ENST00000450680 270 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 AC108729.3-201ENST00000513484 108 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 MIR3658-201ENST00000636291 56 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SALL3Q9BXA9 RNU6-438P-201ENST00000365561 103 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 Y_RNA.369-201ENST00000365568 117 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 SNORD14D-201ENST00000384390 87 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 SNORD116-13-201ENST00000384408 92 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 MIR15B-201ENST00000385045 98 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 MT-TT-201ENST00000387460 66 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 RNU2-55P-201ENST00000411146 174 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 RNU6-57P-201ENST00000411348 103 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 CYP2C59P-201ENST00000457790 269 ntBASIC2.42□□□□□ -2.02
SALL3Q9BXA9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.42□□□□□ -2.02
SALL3Q9BXA9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.42□□□□□ -2.02
SALL3Q9BXA9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SALL3Q9BXA9 CENPCP1-201ENST00000533085 2578 ntBASIC2.41□□□□□ -2.02
SALL3Q9BXA9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SALL3Q9BXA9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SALL3Q9BXA9 RNU6-117P-201ENST00000365415 107 ntBASIC2.41□□□□□ -2.02
SALL3Q9BXA9 RNU6-546P-201ENST00000383991 107 ntBASIC2.41□□□□□ -2.02
SALL3Q9BXA9 AL512604.1-201ENST00000404812 257 ntBASIC2.41□□□□□ -2.02
SALL3Q9BXA9 RN7SKP101-201ENST00000411376 320 ntBASIC2.41□□□□□ -2.02
SALL3Q9BXA9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SALL3Q9BXA9 MTCO1P44-201ENST00000441935 243 ntBASIC2.41□□□□□ -2.02
SALL3Q9BXA9 AC016717.1-201ENST00000448918 286 ntBASIC2.41□□□□□ -2.02
SALL3Q9BXA9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.41□□□□□ -2.02
SALL3Q9BXA9 RNU6-1211P-201ENST00000459179 105 ntBASIC2.41□□□□□ -2.02
SALL3Q9BXA9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.41□□□□□ -2.02
SALL3Q9BXA9 AL596211.1-201ENST00000569873 2277 ntBASIC2.41□□□□□ -2.02
SALL3Q9BXA9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
SALL3Q9BXA9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SALL3Q9BXA9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
SALL3Q9BXA9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
SALL3Q9BXA9 RNU4-11P-201ENST00000365287 132 ntBASIC2.4□□□□□ -2.03
SALL3Q9BXA9 MIR539-201ENST00000365690 78 ntBASIC2.4□□□□□ -2.03
SALL3Q9BXA9 SNORA22-201ENST00000383907 134 ntBASIC2.4□□□□□ -2.03
SALL3Q9BXA9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SALL3Q9BXA9 RNU6-383P-201ENST00000410864 94 ntBASIC2.4□□□□□ -2.03
SALL3Q9BXA9 AC006461.1-201ENST00000412637 326 ntBASIC2.4□□□□□ -2.03
SALL3Q9BXA9 AL161788.1-201ENST00000441805 169 ntBASIC2.4□□□□□ -2.03
SALL3Q9BXA9 AL357134.1-201ENST00000445848 426 ntBASIC2.4□□□□□ -2.03
SALL3Q9BXA9 RNU7-197P-201ENST00000458836 62 ntBASIC2.4□□□□□ -2.03
SALL3Q9BXA9 RNU6-437P-201ENST00000459408 95 ntBASIC2.4□□□□□ -2.03
SALL3Q9BXA9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.4□□□□□ -2.03
SALL3Q9BXA9 AC093259.1-201ENST00000509755 300 ntBASIC2.4□□□□□ -2.03
SALL3Q9BXA9 AL160236.1-201ENST00000556317 195 ntBASIC2.4□□□□□ -2.03
SALL3Q9BXA9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.4□□□□□ -2.03
SALL3Q9BXA9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SALL3Q9BXA9 MIR1248-201ENST00000629190 106 ntBASIC2.4□□□□□ -2.03
SALL3Q9BXA9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SALL3Q9BXA9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
SALL3Q9BXA9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SALL3Q9BXA9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.39□□□□□ -2.03
SALL3Q9BXA9 AL356292.1-201ENST00000283110 373 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 RNU6-834P-201ENST00000362367 110 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 RNU6-199P-201ENST00000362954 107 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 RNU6-1164P-201ENST00000364428 107 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 RNU6-407P-201ENST00000365280 104 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 RNU6-418P-201ENST00000384035 107 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 RNU6-80P-201ENST00000384195 107 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 SNORA72-201ENST00000384339 132 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SALL3Q9BXA9 RNU2-63P-201ENST00000410792 194 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 RNU6-592P-201ENST00000411333 103 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 AC063976.4-201ENST00000421971 163 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 RPS27P1-201ENST00000450552 247 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.39□□□□□ -2.03
SALL3Q9BXA9 SNORA25.12-201ENST00000516202 82 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms