Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC096720.1-201ENST00000604441 183 ntBASIC3.43□□□□□ -1.86
CNTNAP3BQ96NU0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.43□□□□□ -1.86
CNTNAP3BQ96NU0 AC103810.7-201ENST00000607821 91 ntBASIC3.43□□□□□ -1.86
CNTNAP3BQ96NU0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CNTNAP3BQ96NU0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CNTNAP3BQ96NU0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CNTNAP3BQ96NU0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 AL355596.1-201ENST00000565399 3996 ntBASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 RNU6-546P-201ENST00000383991 107 ntBASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 SNORD17-201ENST00000390930 237 ntBASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 Y_RNA.609-201ENST00000410669 89 ntBASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 Z98742.3-201ENST00000418637 326 ntBASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 AC009969.1-201ENST00000438726 172 ntBASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 snoU13.26-201ENST00000459452 105 ntBASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 RNU7-128P-201ENST00000517247 62 ntBASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.42□□□□□ -1.86
CNTNAP3BQ96NU0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 IPO8P1-201ENST00000455509 3109 ntBASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 RNU6-457P-201ENST00000363999 107 ntBASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 RNU6-442P-201ENST00000383968 104 ntBASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 RNU11-5P-201ENST00000391216 129 ntBASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 AL627390.1-201ENST00000396055 340 ntBASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 POLR2J4-204ENST00000418424 324 ntBASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 AC087499.4-201ENST00000448505 178 ntBASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 CYP2C59P-201ENST00000457790 269 ntBASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 U3.44-201ENST00000458938 192 ntBASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 SEM1P1-201ENST00000506694 209 ntBASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 RNU6-341P-201ENST00000516973 96 ntBASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 MIR5739-201ENST00000619803 80 ntBASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CNTNAP3BQ96NU0 MIR199A2-201ENST00000385289 110 ntBASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 AC090844.1-201ENST00000422019 156 ntBASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 HMGN2P18-201ENST00000450680 270 ntBASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 MIR1270-201ENST00000459320 83 ntBASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 CKS1BP2-201ENST00000497342 240 ntBASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 AC093729.1-201ENST00000513074 128 ntBASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 SNORA4.4-201ENST00000515921 135 ntBASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 RNU7-99P-201ENST00000516271 62 ntBASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 AC140658.3-201ENST00000567603 271 ntBASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
CNTNAP3BQ96NU0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CNTNAP3BQ96NU0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CNTNAP3BQ96NU0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CNTNAP3BQ96NU0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CNTNAP3BQ96NU0 RNU6-315P-201ENST00000362666 107 ntBASIC3.39□□□□□ -1.87
CNTNAP3BQ96NU0 SNORA1.1-201ENST00000364671 133 ntBASIC3.39□□□□□ -1.87
CNTNAP3BQ96NU0 MIR802-201ENST00000390235 94 ntBASIC3.39□□□□□ -1.87
CNTNAP3BQ96NU0 AL603825.1-201ENST00000438481 80 ntBASIC3.39□□□□□ -1.87
CNTNAP3BQ96NU0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.39□□□□□ -1.87
CNTNAP3BQ96NU0 MIR376B-201ENST00000614515 100 ntBASIC3.39□□□□□ -1.87
CNTNAP3BQ96NU0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNTNAP3BQ96NU0 SNORD115-2-201ENST00000362842 82 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 SNORD115-20-201ENST00000365099 82 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 MIR1253-201ENST00000408273 105 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 RNU6-1186P-201ENST00000410429 97 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 AL035398.1-201ENST00000430869 322 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 AC083863.1-201ENST00000438811 231 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 AC069257.2-201ENST00000441819 155 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 AC093259.1-201ENST00000509755 300 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 AC108729.3-201ENST00000513484 108 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 RNU1-41P-201ENST00000516161 162 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 RNU1-48P-201ENST00000516400 162 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 RNU6-965P-201ENST00000516721 96 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 MIR3199-1-201ENST00000582434 88 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 RNU6-86P-201ENST00000606534 107 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 AC021613.1-201ENST00000623880 111 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 MIR6079-201ENST00000635807 62 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 AL512310.12-203ENST00000640543 90 ntBASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CNTNAP3BQ96NU0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 Y_RNA.247-201ENST00000364500 92 ntBASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 RNU6-1163P-201ENST00000364516 107 ntBASIC3.37□□□□□ -1.87
CNTNAP3BQ96NU0 SNORA70B-201ENST00000384210 135 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms