Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 AC245047.3-201ENST00000429428 127 ntBASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 MTND2P29-201ENST00000438595 412 ntBASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 HMGN1P7-201ENST00000491722 313 ntBASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 RNU2-56P-201ENST00000516826 190 ntBASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 AC012640.5-201ENST00000623897 319 ntBASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 AL596028.1-201ENST00000326971 197 ntBASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 RNU6-728P-201ENST00000365375 104 ntBASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 SNORA70B-201ENST00000384210 135 ntBASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 MIR524-201ENST00000385242 87 ntBASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 RNA5SP109-201ENST00000391010 116 ntBASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 RNU6-1135P-201ENST00000411083 103 ntBASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 RNA5SP450-201ENST00000411206 102 ntBASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 SEPT7P4-201ENST00000437076 306 ntBASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 SUMO1P3-201ENST00000439961 304 ntBASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 AC023449.1-201ENST00000454464 154 ntBASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 AL049830.1-201ENST00000468034 425 ntBASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 MIR4431-201ENST00000579990 94 ntBASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 AL049861.1-201ENST00000603130 150 ntBASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
ATG4AQ8WYN0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ATG4AQ8WYN0 SNORA63D-201ENST00000364359 132 ntBASIC2.05□□□□□ -2.08
ATG4AQ8WYN0 Y_RNA.357-201ENST00000365487 109 ntBASIC2.05□□□□□ -2.08
ATG4AQ8WYN0 MIR15B-201ENST00000385045 98 ntBASIC2.05□□□□□ -2.08
ATG4AQ8WYN0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
ATG4AQ8WYN0 Y_RNA.587-201ENST00000391210 103 ntBASIC2.05□□□□□ -2.08
ATG4AQ8WYN0 RNU6-394P-201ENST00000410735 107 ntBASIC2.05□□□□□ -2.08
ATG4AQ8WYN0 AL121914.1-201ENST00000450188 156 ntBASIC2.05□□□□□ -2.08
ATG4AQ8WYN0 RNU6-255P-201ENST00000516957 105 ntBASIC2.05□□□□□ -2.08
ATG4AQ8WYN0 SUB1P4-201ENST00000566062 339 ntBASIC2.05□□□□□ -2.08
ATG4AQ8WYN0 MIR3935-201ENST00000583472 104 ntBASIC2.05□□□□□ -2.08
ATG4AQ8WYN0 MIR6840-201ENST00000611937 71 ntBASIC2.05□□□□□ -2.08
ATG4AQ8WYN0 uc_338.4-201ENST00000616635 176 ntBASIC2.05□□□□□ -2.08
ATG4AQ8WYN0 U8.2-201ENST00000363156 134 ntBASIC2.04□□□□□ -2.08
ATG4AQ8WYN0 RNU4-84P-201ENST00000364200 139 ntBASIC2.04□□□□□ -2.08
ATG4AQ8WYN0 Y_RNA.272-201ENST00000364696 102 ntBASIC2.04□□□□□ -2.08
ATG4AQ8WYN0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ATG4AQ8WYN0 SNRPGP10-201ENST00000432323 225 ntBASIC2.04□□□□□ -2.08
ATG4AQ8WYN0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.04□□□□□ -2.08
ATG4AQ8WYN0 RNU6-561P-201ENST00000516222 102 ntBASIC2.04□□□□□ -2.08
ATG4AQ8WYN0 RNA5SP364-201ENST00000516938 78 ntBASIC2.04□□□□□ -2.08
ATG4AQ8WYN0 MIR3144-201ENST00000579460 79 ntBASIC2.04□□□□□ -2.08
ATG4AQ8WYN0 AC104465.1-201ENST00000611365 139 ntBASIC2.04□□□□□ -2.08
ATG4AQ8WYN0 AL591926.4-201ENST00000616895 298 ntBASIC2.04□□□□□ -2.08
ATG4AQ8WYN0 U1.36-201ENST00000620684 176 ntBASIC2.04□□□□□ -2.08
ATG4AQ8WYN0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
ATG4AQ8WYN0 SNORD45.3-201ENST00000363836 72 ntBASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 SNORA3.2-201ENST00000408221 125 ntBASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 MIR1261-201ENST00000408659 82 ntBASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 RNU4-43P-201ENST00000410628 137 ntBASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 Y_RNA.622-201ENST00000411091 108 ntBASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 RNU2-55P-201ENST00000411146 174 ntBASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 SNORD77.4-201ENST00000516158 81 ntBASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 AL365434.2-201ENST00000607979 234 ntBASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 MIR8054-201ENST00000620877 86 ntBASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 AC021753.1-201ENST00000635724 168 ntBASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
ATG4AQ8WYN0 MIR126-201ENST00000362291 85 ntBASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 RNU6-643P-201ENST00000384018 107 ntBASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 RNU4-52P-201ENST00000384209 138 ntBASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 RNU6-804P-201ENST00000384286 107 ntBASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 MIR520A-201ENST00000384862 85 ntBASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 RNU6-440P-201ENST00000390882 105 ntBASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 RNA5SP482-201ENST00000391269 118 ntBASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 NDUFA4P2-201ENST00000489989 244 ntBASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 AC107027.2-201ENST00000512197 115 ntBASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 RNU7-28P-201ENST00000516759 62 ntBASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 RNU2-19P-201ENST00000517288 84 ntBASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
ATG4AQ8WYN0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 Y_RNA.170-201ENST00000363746 110 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 Y_RNA.265-201ENST00000364677 108 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 RNU6-1138P-201ENST00000365359 106 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 RNU6-484P-201ENST00000384016 107 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 SNORA6-201ENST00000384033 151 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 Y_RNA.432-201ENST00000384087 111 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 RNU6-950P-201ENST00000384651 107 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 RNU6-239P-201ENST00000390990 99 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 SNORD23.1-201ENST00000408212 104 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 MIR548M-201ENST00000408260 86 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 RNA5SP425-201ENST00000410336 112 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 RN7SKP192-201ENST00000411291 327 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
ATG4AQ8WYN0 SNRPGP8-201ENST00000454064 226 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms