Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.92□□□□□ -1.78
NKX2-3Q8TAU0 MIR4762-201ENST00000585261 75 ntBASIC3.92□□□□□ -1.78
NKX2-3Q8TAU0 MIR6079-201ENST00000635807 62 ntBASIC3.92□□□□□ -1.78
NKX2-3Q8TAU0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
NKX2-3Q8TAU0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-3Q8TAU0 RNU6-1313P-201ENST00000362622 102 ntBASIC3.91□□□□□ -1.78
NKX2-3Q8TAU0 AL159169.1-201ENST00000421119 127 ntBASIC3.91□□□□□ -1.78
NKX2-3Q8TAU0 SNORA70.19-201ENST00000516717 90 ntBASIC3.91□□□□□ -1.78
NKX2-3Q8TAU0 RNU7-128P-201ENST00000517247 62 ntBASIC3.91□□□□□ -1.78
NKX2-3Q8TAU0 AC103810.1-201ENST00000579873 453 ntBASIC3.91□□□□□ -1.78
NKX2-3Q8TAU0 AC002984.1-201ENST00000591692 448 ntBASIC3.91□□□□□ -1.78
NKX2-3Q8TAU0 AL513534.2-201ENST00000603836 250 ntBASIC3.91□□□□□ -1.78
NKX2-3Q8TAU0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
NKX2-3Q8TAU0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-3Q8TAU0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-3Q8TAU0 MIR767-201ENST00000390228 109 ntBASIC3.9□□□□□ -1.79
NKX2-3Q8TAU0 RNU6-1186P-201ENST00000410429 97 ntBASIC3.9□□□□□ -1.79
NKX2-3Q8TAU0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.9□□□□□ -1.79
NKX2-3Q8TAU0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.9□□□□□ -1.79
NKX2-3Q8TAU0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
NKX2-3Q8TAU0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-3Q8TAU0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NKX2-3Q8TAU0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.9□□□□□ -1.79
NKX2-3Q8TAU0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.9□□□□□ -1.79
NKX2-3Q8TAU0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-3Q8TAU0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-3Q8TAU0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.89□□□□□ -1.79
NKX2-3Q8TAU0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-3Q8TAU0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-3Q8TAU0 SNORD6-201ENST00000365444 73 ntBASIC3.89□□□□□ -1.79
NKX2-3Q8TAU0 AL031183.1-201ENST00000457667 207 ntBASIC3.89□□□□□ -1.79
NKX2-3Q8TAU0 AL049830.1-201ENST00000468034 425 ntBASIC3.89□□□□□ -1.79
NKX2-3Q8TAU0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.89□□□□□ -1.79
NKX2-3Q8TAU0 MIR2682-201ENST00000580305 110 ntBASIC3.89□□□□□ -1.79
NKX2-3Q8TAU0 U7.4-201ENST00000614961 63 ntBASIC3.89□□□□□ -1.79
NKX2-3Q8TAU0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-3Q8TAU0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-3Q8TAU0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-3Q8TAU0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
NKX2-3Q8TAU0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
NKX2-3Q8TAU0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
NKX2-3Q8TAU0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.88□□□□□ -1.79
NKX2-3Q8TAU0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NKX2-3Q8TAU0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.88□□□□□ -1.79
NKX2-3Q8TAU0 Y_RNA.336-201ENST00000365307 109 ntBASIC3.88□□□□□ -1.79
NKX2-3Q8TAU0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NKX2-3Q8TAU0 Z98742.2-201ENST00000431564 187 ntBASIC3.88□□□□□ -1.79
NKX2-3Q8TAU0 AC021613.1-201ENST00000623880 111 ntBASIC3.88□□□□□ -1.79
NKX2-3Q8TAU0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 MIR449A-201ENST00000362113 91 ntBASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 SNORD115-2-201ENST00000362842 82 ntBASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 U8.5-201ENST00000364528 136 ntBASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 SNORA1.1-201ENST00000364671 133 ntBASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 Y_RNA.267-201ENST00000364679 109 ntBASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 SNORD115-20-201ENST00000365099 82 ntBASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 SNORA44-201ENST00000384584 132 ntBASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 SNORD77B-201ENST00000391112 67 ntBASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 HMGN2P34-201ENST00000437647 269 ntBASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 AP002004.2-201ENST00000531656 154 ntBASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 ELOCP29-201ENST00000588193 334 ntBASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 AL137790.1-201ENST00000634283 177 ntBASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-3Q8TAU0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-3Q8TAU0 snoU2-30.1-201ENST00000365012 70 ntBASIC3.86□□□□□ -1.79
NKX2-3Q8TAU0 POLR2J4-204ENST00000418424 324 ntBASIC3.86□□□□□ -1.79
NKX2-3Q8TAU0 RNU7-170P-201ENST00000459303 61 ntBASIC3.86□□□□□ -1.79
NKX2-3Q8TAU0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX2-3Q8TAU0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-3Q8TAU0 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.86□□□□□ -1.79
NKX2-3Q8TAU0 AL512310.12-203ENST00000640543 90 ntBASIC3.86□□□□□ -1.79
NKX2-3Q8TAU0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-3Q8TAU0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-3Q8TAU0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 AC060773.1-201ENST00000421698 310 ntBASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 AC093259.1-201ENST00000509755 300 ntBASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 AC108729.3-201ENST00000513484 108 ntBASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 RNA5SP112-201ENST00000515937 99 ntBASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 SNORA70.14-201ENST00000516205 110 ntBASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 SNORD59.2-201ENST00000516873 68 ntBASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 RNU6-711P-201ENST00000517255 106 ntBASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 AL033523.1-201ENST00000605153 153 ntBASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX2-3Q8TAU0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.84□□□□□ -1.79
NKX2-3Q8TAU0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NKX2-3Q8TAU0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NKX2-3Q8TAU0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NKX2-3Q8TAU0 MIR184-201ENST00000384962 84 ntBASIC3.84□□□□□ -1.79
NKX2-3Q8TAU0 Y_RNA.609-201ENST00000410669 89 ntBASIC3.84□□□□□ -1.79
NKX2-3Q8TAU0 AC123900.1-201ENST00000420390 96 ntBASIC3.84□□□□□ -1.79
NKX2-3Q8TAU0 AC009414.1-201ENST00000427200 443 ntBASIC3.84□□□□□ -1.79
NKX2-3Q8TAU0 RNU7-96P-201ENST00000459535 64 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms