Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RNU6-711P-201ENST00000517255 106 ntBASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 AC107016.2-201ENST00000547968 190 ntBASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 MIR548BB-201ENST00000626714 66 ntBASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NEDD1Q8NHV4 AC009487.4-201ENST00000624969 3585 ntBASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 RNU6-661P-201ENST00000362409 107 ntBASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 Y_RNA.155-201ENST00000363632 101 ntBASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 Y_RNA.565-201ENST00000384719 101 ntBASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 RNU6-679P-201ENST00000391003 106 ntBASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 Y_RNA.621-201ENST00000411065 96 ntBASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 AC006483.1-201ENST00000487308 313 ntBASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 RN7SL633P-201ENST00000488974 297 ntBASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 AC090115.4-201ENST00000609970 188 ntBASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 SCARNA15.3-201ENST00000626315 122 ntBASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 SCARNA4.1-201ENST00000628597 123 ntBASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.43□□□□□ -1.86
NEDD1Q8NHV4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 Y_RNA.95-201ENST00000363079 95 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 RNU4-67P-201ENST00000364569 141 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 Y_RNA.316-201ENST00000365118 111 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 SNORA9.2-201ENST00000365361 133 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 Y_RNA.440-201ENST00000384120 114 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 RNU1-101P-201ENST00000391171 127 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 MIR548O-201ENST00000408583 114 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 RNU6-887P-201ENST00000410660 100 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 AC025750.2-201ENST00000442609 450 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 SNORA59A-201ENST00000459326 152 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 Y_RNA.659-201ENST00000515994 113 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 RNU7-25P-201ENST00000516544 62 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 MIR3609-201ENST00000582661 80 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 AL513534.2-201ENST00000603836 250 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 MIR203B-201ENST00000636080 86 ntBASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.42□□□□□ -1.86
NEDD1Q8NHV4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NEDD1Q8NHV4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.41□□□□□ -1.86
NEDD1Q8NHV4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NEDD1Q8NHV4 AL365361.1-201ENST00000566942 3481 ntBASIC3.41□□□□□ -1.86
NEDD1Q8NHV4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.41□□□□□ -1.86
NEDD1Q8NHV4 Y_RNA.37-201ENST00000362606 108 ntBASIC3.41□□□□□ -1.86
NEDD1Q8NHV4 RNU6-409P-201ENST00000384114 104 ntBASIC3.41□□□□□ -1.86
NEDD1Q8NHV4 RPL36AP48-201ENST00000485521 314 ntBASIC3.41□□□□□ -1.86
NEDD1Q8NHV4 AC092185.1-201ENST00000491371 97 ntBASIC3.41□□□□□ -1.86
NEDD1Q8NHV4 SNORA31.4-201ENST00000516049 129 ntBASIC3.41□□□□□ -1.86
NEDD1Q8NHV4 MIR6076-201ENST00000617521 113 ntBASIC3.41□□□□□ -1.86
NEDD1Q8NHV4 AC064859.1-201ENST00000624741 174 ntBASIC3.41□□□□□ -1.86
NEDD1Q8NHV4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NEDD1Q8NHV4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
NEDD1Q8NHV4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NEDD1Q8NHV4 ZNF271P-202ENST00000465539 1970 ntBASIC3.4□□□□□ -1.86
NEDD1Q8NHV4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NEDD1Q8NHV4 MIR520G-201ENST00000385064 90 ntBASIC3.4□□□□□ -1.87
NEDD1Q8NHV4 MIR1294-201ENST00000408503 142 ntBASIC3.4□□□□□ -1.87
NEDD1Q8NHV4 Y_RNA.607-201ENST00000410597 98 ntBASIC3.4□□□□□ -1.87
NEDD1Q8NHV4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.4□□□□□ -1.87
NEDD1Q8NHV4 RPS23P4-201ENST00000487908 423 ntBASIC3.4□□□□□ -1.87
NEDD1Q8NHV4 SNORA31.1-201ENST00000515993 133 ntBASIC3.4□□□□□ -1.87
NEDD1Q8NHV4 SNORA31.5-201ENST00000516190 133 ntBASIC3.4□□□□□ -1.87
NEDD1Q8NHV4 Y_RNA.705-201ENST00000516862 110 ntBASIC3.4□□□□□ -1.87
NEDD1Q8NHV4 RNA5SP380-201ENST00000517190 98 ntBASIC3.4□□□□□ -1.87
NEDD1Q8NHV4 MIR7106-201ENST00000612419 65 ntBASIC3.4□□□□□ -1.87
NEDD1Q8NHV4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.4□□□□□ -1.87
NEDD1Q8NHV4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 RNU6-509P-201ENST00000363519 107 ntBASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 RNU4-16P-201ENST00000364737 141 ntBASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 SNORA18-201ENST00000384416 132 ntBASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 AL512326.2-201ENST00000426359 151 ntBASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 UQCRHP3-201ENST00000451503 251 ntBASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 AC010099.1-201ENST00000455434 375 ntBASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 RNA5SP310-201ENST00000459084 116 ntBASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 RPS29P21-201ENST00000496272 170 ntBASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 RNU6-1291P-201ENST00000516591 104 ntBASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 AC091932.4-201ENST00000623386 200 ntBASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NEDD1Q8NHV4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.38□□□□□ -1.87
NEDD1Q8NHV4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.38□□□□□ -1.87
NEDD1Q8NHV4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NEDD1Q8NHV4 SNORD115-28-201ENST00000363931 81 ntBASIC3.38□□□□□ -1.87
NEDD1Q8NHV4 SNORD45B-201ENST00000364617 72 ntBASIC3.38□□□□□ -1.87
NEDD1Q8NHV4 Y_RNA.547-201ENST00000384654 119 ntBASIC3.38□□□□□ -1.87
NEDD1Q8NHV4 RNU6-1006P-201ENST00000516998 103 ntBASIC3.38□□□□□ -1.87
NEDD1Q8NHV4 RNU7-128P-201ENST00000517247 62 ntBASIC3.38□□□□□ -1.87
NEDD1Q8NHV4 AC245166.1-201ENST00000521012 253 ntBASIC3.38□□□□□ -1.87
NEDD1Q8NHV4 AC006441.5-201ENST00000612680 209 ntBASIC3.38□□□□□ -1.87
NEDD1Q8NHV4 U4atac.1-201ENST00000618345 95 ntBASIC3.38□□□□□ -1.87
NEDD1Q8NHV4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.38□□□□□ -1.87
NEDD1Q8NHV4 MIR148B-201ENST00000362252 99 ntBASIC3.37□□□□□ -1.87
NEDD1Q8NHV4 Y_RNA.377-201ENST00000365644 108 ntBASIC3.37□□□□□ -1.87
NEDD1Q8NHV4 SNORD58A-201ENST00000383875 65 ntBASIC3.37□□□□□ -1.87
NEDD1Q8NHV4 RNU6-1274P-201ENST00000384557 107 ntBASIC3.37□□□□□ -1.87
NEDD1Q8NHV4 SNORA48.8-201ENST00000391324 134 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms