Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SNORA31.26-201ENST00000517250 137 ntBASIC3.24□□□□□ -1.89
SIX5Q8N196 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.24□□□□□ -1.89
SIX5Q8N196 MIR4435-1-201ENST00000582552 80 ntBASIC3.24□□□□□ -1.89
SIX5Q8N196 ELOCP29-201ENST00000588193 334 ntBASIC3.24□□□□□ -1.89
SIX5Q8N196 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIX5Q8N196 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIX5Q8N196 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIX5Q8N196 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.23□□□□□ -1.89
SIX5Q8N196 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIX5Q8N196 RNU1-58P-201ENST00000362413 163 ntBASIC3.23□□□□□ -1.89
SIX5Q8N196 Y_RNA.366-201ENST00000365540 102 ntBASIC3.23□□□□□ -1.89
SIX5Q8N196 SNORA54-201ENST00000384281 123 ntBASIC3.23□□□□□ -1.89
SIX5Q8N196 RNA5SP109-201ENST00000391010 116 ntBASIC3.23□□□□□ -1.89
SIX5Q8N196 MIR1261-201ENST00000408659 82 ntBASIC3.23□□□□□ -1.89
SIX5Q8N196 AL445646.1-201ENST00000431784 216 ntBASIC3.23□□□□□ -1.89
SIX5Q8N196 STAG3L5P-204ENST00000443759 179 ntBASIC3.23□□□□□ -1.89
SIX5Q8N196 RNA5SP367-201ENST00000516557 118 ntBASIC3.23□□□□□ -1.89
SIX5Q8N196 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.23□□□□□ -1.89
SIX5Q8N196 AC004486.1-201ENST00000546846 233 ntBASIC3.23□□□□□ -1.89
SIX5Q8N196 SNORA28-201ENST00000606769 126 ntBASIC3.23□□□□□ -1.89
SIX5Q8N196 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.23□□□□□ -1.89
SIX5Q8N196 AC022149.2-201ENST00000621061 203 ntBASIC3.23□□□□□ -1.89
SIX5Q8N196 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.23□□□□□ -1.89
SIX5Q8N196 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIX5Q8N196 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.22□□□□□ -1.89
SIX5Q8N196 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.22□□□□□ -1.89
SIX5Q8N196 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SIX5Q8N196 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SIX5Q8N196 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIX5Q8N196 RNU4-82P-201ENST00000362443 140 ntBASIC3.22□□□□□ -1.89
SIX5Q8N196 RNU6-268P-201ENST00000364174 107 ntBASIC3.22□□□□□ -1.89
SIX5Q8N196 SNORD56.5-201ENST00000364281 72 ntBASIC3.22□□□□□ -1.89
SIX5Q8N196 RN7SKP123-201ENST00000410732 291 ntBASIC3.22□□□□□ -1.89
SIX5Q8N196 AL606517.2-201ENST00000442855 241 ntBASIC3.22□□□□□ -1.89
SIX5Q8N196 MIR4319-201ENST00000577285 85 ntBASIC3.22□□□□□ -1.89
SIX5Q8N196 AC015726.2-201ENST00000620112 122 ntBASIC3.22□□□□□ -1.89
SIX5Q8N196 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.22□□□□□ -1.89
SIX5Q8N196 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SIX5Q8N196 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SIX5Q8N196 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SIX5Q8N196 Y_RNA.37-201ENST00000362606 108 ntBASIC3.21□□□□□ -1.9
SIX5Q8N196 SNORA38-201ENST00000363946 132 ntBASIC3.21□□□□□ -1.9
SIX5Q8N196 RNU6-690P-201ENST00000365242 106 ntBASIC3.21□□□□□ -1.9
SIX5Q8N196 Y_RNA.547-201ENST00000384654 119 ntBASIC3.21□□□□□ -1.9
SIX5Q8N196 RPL21P3-201ENST00000395517 478 ntBASIC3.21□□□□□ -1.9
SIX5Q8N196 CALM2P4-201ENST00000430810 426 ntBASIC3.21□□□□□ -1.9
SIX5Q8N196 AL139132.1-201ENST00000431587 344 ntBASIC3.21□□□□□ -1.9
SIX5Q8N196 RNU7-26P-201ENST00000458980 63 ntBASIC3.21□□□□□ -1.9
SIX5Q8N196 RNU6-240P-201ENST00000516098 97 ntBASIC3.21□□□□□ -1.9
SIX5Q8N196 MIR376A2-201ENST00000636782 80 ntBASIC3.21□□□□□ -1.9
SIX5Q8N196 MIR622-201ENST00000638396 96 ntBASIC3.21□□□□□ -1.9
SIX5Q8N196 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.21□□□□□ -1.9
SIX5Q8N196 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.2□□□□□ -1.9
SIX5Q8N196 SNORD38C-201ENST00000384381 69 ntBASIC3.2□□□□□ -1.9
SIX5Q8N196 RNU6-163P-201ENST00000384396 106 ntBASIC3.2□□□□□ -1.9
SIX5Q8N196 SNORD15B-201ENST00000384714 146 ntBASIC3.2□□□□□ -1.9
SIX5Q8N196 MIR570-201ENST00000384917 97 ntBASIC3.2□□□□□ -1.9
SIX5Q8N196 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.2□□□□□ -1.9
SIX5Q8N196 AC069257.2-201ENST00000441819 155 ntBASIC3.2□□□□□ -1.9
SIX5Q8N196 AL135938.1-201ENST00000443141 297 ntBASIC3.2□□□□□ -1.9
SIX5Q8N196 COX6CP6-201ENST00000490840 228 ntBASIC3.2□□□□□ -1.9
SIX5Q8N196 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.2□□□□□ -1.9
SIX5Q8N196 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.2□□□□□ -1.9
SIX5Q8N196 SNORA18.7-201ENST00000516910 131 ntBASIC3.2□□□□□ -1.9
SIX5Q8N196 uc_338.25-201ENST00000613756 156 ntBASIC3.2□□□□□ -1.9
SIX5Q8N196 AC017071.1-201ENST00000564407 2204 ntBASIC3.2□□□□□ -1.9
SIX5Q8N196 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SIX5Q8N196 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.19□□□□□ -1.9
SIX5Q8N196 RNU6-1019P-201ENST00000364424 107 ntBASIC3.19□□□□□ -1.9
SIX5Q8N196 RNU6-440P-201ENST00000390882 105 ntBASIC3.19□□□□□ -1.9
SIX5Q8N196 AC105272.1-201ENST00000438604 198 ntBASIC3.19□□□□□ -1.9
SIX5Q8N196 AL031737.1-201ENST00000450125 223 ntBASIC3.19□□□□□ -1.9
SIX5Q8N196 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.19□□□□□ -1.9
SIX5Q8N196 MIR8054-201ENST00000620877 86 ntBASIC3.19□□□□□ -1.9
SIX5Q8N196 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIX5Q8N196 ZNF720P1-201ENST00000562403 1939 ntBASIC3.19□□□□□ -1.9
SIX5Q8N196 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIX5Q8N196 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.18□□□□□ -1.9
SIX5Q8N196 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIX5Q8N196 MIR30E-201ENST00000362104 92 ntBASIC3.18□□□□□ -1.9
SIX5Q8N196 RNU1-133P-201ENST00000364867 167 ntBASIC3.18□□□□□ -1.9
SIX5Q8N196 RNA5SP229-201ENST00000410809 99 ntBASIC3.18□□□□□ -1.9
SIX5Q8N196 RNA5SP184-201ENST00000411071 108 ntBASIC3.18□□□□□ -1.9
SIX5Q8N196 RN7SKP132-201ENST00000516001 208 ntBASIC3.18□□□□□ -1.9
SIX5Q8N196 RNA5SP170-201ENST00000517150 101 ntBASIC3.18□□□□□ -1.9
SIX5Q8N196 AC007012.1-201ENST00000567192 175 ntBASIC3.18□□□□□ -1.9
SIX5Q8N196 AC022202.1-201ENST00000613515 211 ntBASIC3.18□□□□□ -1.9
SIX5Q8N196 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIX5Q8N196 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIX5Q8N196 MIR22-201ENST00000362190 85 ntBASIC3.17□□□□□ -1.9
SIX5Q8N196 Y_RNA.116-201ENST00000363292 103 ntBASIC3.17□□□□□ -1.9
SIX5Q8N196 MIR759-201ENST00000390224 91 ntBASIC3.17□□□□□ -1.9
SIX5Q8N196 BX510359.4-201ENST00000423750 193 ntBASIC3.17□□□□□ -1.9
SIX5Q8N196 SNRPGP14-201ENST00000435400 219 ntBASIC3.17□□□□□ -1.9
SIX5Q8N196 RPS26P48-201ENST00000491713 339 ntBASIC3.17□□□□□ -1.9
SIX5Q8N196 SNORD36C-201ENST00000516733 66 ntBASIC3.17□□□□□ -1.9
SIX5Q8N196 AP003484.1-201ENST00000530974 250 ntBASIC3.17□□□□□ -1.9
SIX5Q8N196 AC084364.2-201ENST00000546924 395 ntBASIC3.17□□□□□ -1.9
SIX5Q8N196 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.17□□□□□ -1.9
SIX5Q8N196 MIR5094-201ENST00000578766 85 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms