Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
USP48Q86UV5 RNU4-41P-201ENST00000364426 143 ntBASIC2.96□□□□□ -1.94
USP48Q86UV5 Y_RNA.251-201ENST00000364551 99 ntBASIC2.96□□□□□ -1.94
USP48Q86UV5 RNA5SP205-201ENST00000364653 136 ntBASIC2.96□□□□□ -1.94
USP48Q86UV5 SNORD50B-201ENST00000364995 70 ntBASIC2.96□□□□□ -1.94
USP48Q86UV5 Y_RNA.420-201ENST00000384043 110 ntBASIC2.96□□□□□ -1.94
USP48Q86UV5 MIR562-201ENST00000384894 95 ntBASIC2.96□□□□□ -1.94
USP48Q86UV5 AL359511.1-201ENST00000402970 211 ntBASIC2.96□□□□□ -1.94
USP48Q86UV5 RNU7-94P-201ENST00000459576 63 ntBASIC2.96□□□□□ -1.94
USP48Q86UV5 RPS26P45-201ENST00000471748 340 ntBASIC2.96□□□□□ -1.94
USP48Q86UV5 AC112693.2-201ENST00000556538 232 ntBASIC2.96□□□□□ -1.94
USP48Q86UV5 MIR2681-201ENST00000581814 105 ntBASIC2.96□□□□□ -1.94
USP48Q86UV5 AC091178.2-201ENST00000584401 117 ntBASIC2.96□□□□□ -1.94
USP48Q86UV5 AL929325.1-201ENST00000603096 117 ntBASIC2.96□□□□□ -1.94
USP48Q86UV5 AL021707.8-201ENST00000609428 183 ntBASIC2.96□□□□□ -1.94
USP48Q86UV5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.96□□□□□ -1.94
USP48Q86UV5 ZNF271P-202ENST00000465539 1970 ntBASIC2.95□□□□□ -1.94
USP48Q86UV5 Y_RNA.203-201ENST00000364106 102 ntBASIC2.95□□□□□ -1.94
USP48Q86UV5 RNU6-728P-201ENST00000365375 104 ntBASIC2.95□□□□□ -1.94
USP48Q86UV5 RNA5SP496-201ENST00000391240 109 ntBASIC2.95□□□□□ -1.94
USP48Q86UV5 MIR513C-201ENST00000401352 84 ntBASIC2.95□□□□□ -1.94
USP48Q86UV5 RNU6-588P-201ENST00000410281 105 ntBASIC2.95□□□□□ -1.94
USP48Q86UV5 RN7SKP101-201ENST00000411376 320 ntBASIC2.95□□□□□ -1.94
USP48Q86UV5 HMGN2P35-201ENST00000412164 270 ntBASIC2.95□□□□□ -1.94
USP48Q86UV5 AC099677.2-201ENST00000436385 175 ntBASIC2.95□□□□□ -1.94
USP48Q86UV5 RNU6-1234P-201ENST00000516877 103 ntBASIC2.95□□□□□ -1.94
USP48Q86UV5 MIR5092-201ENST00000583139 88 ntBASIC2.95□□□□□ -1.94
USP48Q86UV5 AL137847.3-201ENST00000611521 109 ntBASIC2.95□□□□□ -1.94
USP48Q86UV5 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.95□□□□□ -1.94
USP48Q86UV5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
USP48Q86UV5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
USP48Q86UV5 Y_RNA.81-201ENST00000362997 102 ntBASIC2.94□□□□□ -1.94
USP48Q86UV5 SNORD45.3-201ENST00000363836 72 ntBASIC2.94□□□□□ -1.94
USP48Q86UV5 RNY3P5-201ENST00000384127 102 ntBASIC2.94□□□□□ -1.94
USP48Q86UV5 RNU6-460P-201ENST00000391158 108 ntBASIC2.94□□□□□ -1.94
USP48Q86UV5 Y_RNA.622-201ENST00000411091 108 ntBASIC2.94□□□□□ -1.94
USP48Q86UV5 RPS12P2-201ENST00000439728 269 ntBASIC2.94□□□□□ -1.94
USP48Q86UV5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.94□□□□□ -1.94
USP48Q86UV5 RNU6-341P-201ENST00000516973 96 ntBASIC2.94□□□□□ -1.94
USP48Q86UV5 AC022513.1-201ENST00000624512 117 ntBASIC2.94□□□□□ -1.94
USP48Q86UV5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
USP48Q86UV5 Y_RNA.127-201ENST00000363386 109 ntBASIC2.93□□□□□ -1.94
USP48Q86UV5 MIR518A2-201ENST00000384966 87 ntBASIC2.93□□□□□ -1.94
USP48Q86UV5 RNU11-3P-201ENST00000391111 133 ntBASIC2.93□□□□□ -1.94
USP48Q86UV5 RNA5SP465-201ENST00000391195 109 ntBASIC2.93□□□□□ -1.94
USP48Q86UV5 Y_RNA.621-201ENST00000411065 96 ntBASIC2.93□□□□□ -1.94
USP48Q86UV5 RNA5SP270-201ENST00000411361 118 ntBASIC2.93□□□□□ -1.94
USP48Q86UV5 CYCSP49-201ENST00000420810 319 ntBASIC2.93□□□□□ -1.94
USP48Q86UV5 AL163195.1-201ENST00000496941 348 ntBASIC2.93□□□□□ -1.94
USP48Q86UV5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.93□□□□□ -1.94
USP48Q86UV5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.93□□□□□ -1.94
USP48Q86UV5 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.93□□□□□ -1.94
USP48Q86UV5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
USP48Q86UV5 AC131280.1-202ENST00000624067 4211 ntBASIC2.92□□□□□ -1.94
USP48Q86UV5 AC007336.1-201ENST00000576365 3828 ntBASIC2.92□□□□□ -1.94
USP48Q86UV5 RNU6-1082P-201ENST00000364574 107 ntBASIC2.92□□□□□ -1.94
USP48Q86UV5 MIR524-201ENST00000385242 87 ntBASIC2.92□□□□□ -1.94
USP48Q86UV5 HMGN2P39-201ENST00000398005 273 ntBASIC2.92□□□□□ -1.94
USP48Q86UV5 AC233266.1-201ENST00000454518 96 ntBASIC2.92□□□□□ -1.94
USP48Q86UV5 RNA5SP458-201ENST00000516188 119 ntBASIC2.92□□□□□ -1.94
USP48Q86UV5 MIR3646-201ENST00000578301 84 ntBASIC2.92□□□□□ -1.94
USP48Q86UV5 AC069114.2-201ENST00000604699 304 ntBASIC2.92□□□□□ -1.94
USP48Q86UV5 SNORD14A-201ENST00000606526 91 ntBASIC2.92□□□□□ -1.94
USP48Q86UV5 AC242852.1-201ENST00000612151 96 ntBASIC2.92□□□□□ -1.94
USP48Q86UV5 AC244015.1-201ENST00000622301 99 ntBASIC2.92□□□□□ -1.94
USP48Q86UV5 Y_RNA.267-201ENST00000364679 109 ntBASIC2.91□□□□□ -1.94
USP48Q86UV5 Y_RNA.393-201ENST00000383936 102 ntBASIC2.91□□□□□ -1.94
USP48Q86UV5 SNORD20-201ENST00000384550 80 ntBASIC2.91□□□□□ -1.94
USP48Q86UV5 MIR597-201ENST00000384968 97 ntBASIC2.91□□□□□ -1.94
USP48Q86UV5 Y_RNA.587-201ENST00000391210 103 ntBASIC2.91□□□□□ -1.94
USP48Q86UV5 AC008267.6-201ENST00000441664 139 ntBASIC2.91□□□□□ -1.94
USP48Q86UV5 HMGN2P23-201ENST00000456759 269 ntBASIC2.91□□□□□ -1.94
USP48Q86UV5 RNU6-1211P-201ENST00000459179 105 ntBASIC2.91□□□□□ -1.94
USP48Q86UV5 RNU6-1333P-201ENST00000516162 93 ntBASIC2.91□□□□□ -1.94
USP48Q86UV5 RNU6-1291P-201ENST00000516591 104 ntBASIC2.91□□□□□ -1.94
USP48Q86UV5 RNU1-104P-201ENST00000517280 175 ntBASIC2.91□□□□□ -1.94
USP48Q86UV5 AL358944.1-201ENST00000528537 144 ntBASIC2.91□□□□□ -1.94
USP48Q86UV5 MIR6844-201ENST00000637122 62 ntBASIC2.91□□□□□ -1.94
USP48Q86UV5 RNU6-199P-201ENST00000362954 107 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 RNU6-1336P-201ENST00000383886 109 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 SNORD116-14-201ENST00000383894 92 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 SNORD116-17-201ENST00000383929 92 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 RNU6-484P-201ENST00000384016 107 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 RNU1-52P-201ENST00000384190 164 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 SNORD116-15-201ENST00000384445 92 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 SNORD116-19-201ENST00000384729 92 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 MIR1283-2-201ENST00000408621 87 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 Y_RNA.629-201ENST00000411368 105 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 AC023449.1-201ENST00000454464 154 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 RNA5SP402-201ENST00000517148 110 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.9□□□□□ -1.95
USP48Q86UV5 JPX_2.1-201ENST00000614161 69 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 AP001340.1-201ENST00000624405 217 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 MIR203B-201ENST00000636080 86 ntBASIC2.9□□□□□ -1.95
USP48Q86UV5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
USP48Q86UV5 Y_RNA.164-201ENST00000363709 102 ntBASIC2.89□□□□□ -1.95
USP48Q86UV5 RNU6-1080P-201ENST00000383982 107 ntBASIC2.89□□□□□ -1.95
USP48Q86UV5 SNORD37.2-201ENST00000391075 66 ntBASIC2.89□□□□□ -1.95
USP48Q86UV5 RPS27P1-201ENST00000450552 247 ntBASIC2.89□□□□□ -1.95
USP48Q86UV5 AP002004.2-201ENST00000531656 154 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms