Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC120024.3-201ENST00000603167 156 ntBASIC2.33□□□□□ -2.04
POLR2AP24928 AL449363.1-201ENST00000617815 186 ntBASIC2.33□□□□□ -2.04
POLR2AP24928 MIR5739-201ENST00000619803 80 ntBASIC2.33□□□□□ -2.04
POLR2AP24928 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
POLR2AP24928 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.33□□□□□ -2.04
POLR2AP24928 AL136164.4-201ENST00000625013 2135 ntBASIC2.33□□□□□ -2.04
POLR2AP24928 AC138915.1-201ENST00000565427 1685 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 Y_RNA.81-201ENST00000362997 102 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 RNU6-309P-201ENST00000364573 106 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 SNORD21-201ENST00000383953 95 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 MIR624-201ENST00000385217 97 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 AC016717.1-201ENST00000448918 286 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 AL121914.1-201ENST00000450188 156 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 RPL23AP63-201ENST00000498752 471 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.32□□□□□ -2.04
POLR2AP24928 RNU6-711P-201ENST00000517255 106 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 MIR6132-201ENST00000622083 109 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 AC068647.2-201ENST00000637380 353 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
POLR2AP24928 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
POLR2AP24928 Y_RNA.796-201ENST00000364268 102 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 RNU4-41P-201ENST00000364426 143 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 Y_RNA.799-201ENST00000364992 102 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 U8.9-201ENST00000365667 134 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 RNU6-546P-201ENST00000383991 107 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 RNA5SP467-201ENST00000391274 118 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 AC060773.1-201ENST00000421698 310 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 RPS26P55-201ENST00000471178 356 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 RPS29P11-201ENST00000496507 171 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 AL137847.3-201ENST00000611521 109 ntBASIC2.32□□□□□ -2.04
POLR2AP24928 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
POLR2AP24928 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.31□□□□□ -2.04
POLR2AP24928 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.31□□□□□ -2.04
POLR2AP24928 RNA5SP511-201ENST00000410487 115 ntBASIC2.31□□□□□ -2.04
POLR2AP24928 AC104332.2-201ENST00000429959 156 ntBASIC2.31□□□□□ -2.04
POLR2AP24928 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.31□□□□□ -2.04
POLR2AP24928 AC090517.3-201ENST00000625170 141 ntBASIC2.31□□□□□ -2.04
POLR2AP24928 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.31□□□□□ -2.04
POLR2AP24928 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.3□□□□□ -2.04
POLR2AP24928 RNU4-13P-201ENST00000364019 141 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 SNORD18B-201ENST00000365659 72 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 DEFA7P-201ENST00000382676 285 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 RNU6-160P-201ENST00000384591 107 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 RNU2-48P-201ENST00000410694 191 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 AL158823.1-201ENST00000418441 478 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 AL161788.1-201ENST00000441805 169 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.3□□□□□ -2.04
POLR2AP24928 RNU6-1053P-201ENST00000515930 101 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 RNU6-693P-201ENST00000516134 107 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 RNU2-56P-201ENST00000516826 190 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 RNU2-60P-201ENST00000517290 128 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 RPL23AP91-201ENST00000569211 455 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 MIR3117-201ENST00000584034 78 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 RNA5SP190-201ENST00000365222 118 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
POLR2AP24928 SNORA26-201ENST00000391286 122 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 AL603914.1-201ENST00000401964 204 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 ATP5EP1-201ENST00000510257 156 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 RNU4-57P-201ENST00000515980 135 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 RNA5SP236-201ENST00000516169 116 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 RNU2-34P-201ENST00000516534 121 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 AL353149.1-201ENST00000610667 244 ntBASIC2.3□□□□□ -2.04
POLR2AP24928 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
POLR2AP24928 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
POLR2AP24928 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
POLR2AP24928 RNU6-834P-201ENST00000362367 110 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 Y_RNA.242-201ENST00000364473 110 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 SNORA25.9-201ENST00000365087 128 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 Y_RNA.346-201ENST00000365385 112 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 RNA5SP181-201ENST00000410246 98 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 RNU6-948P-201ENST00000516374 107 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 RNA5SP153-201ENST00000516498 76 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 RNU6-826P-201ENST00000516827 104 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 RNU6-586P-201ENST00000517265 104 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 AL049861.1-201ENST00000603130 150 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 Y_RNA.783-201ENST00000613546 102 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
POLR2AP24928 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
POLR2AP24928 Y_RNA.43-201ENST00000362670 111 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 RNY1P10-201ENST00000363268 113 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 MIR489-201ENST00000384923 84 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 AC011753.1-201ENST00000451001 220 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 ATP5J2P3-201ENST00000451550 258 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 AC090515.1-201ENST00000465295 476 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
POLR2AP24928 MIR378D2-201ENST00000580636 98 ntBASIC2.29□□□□□ -2.04
POLR2AP24928 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
POLR2AP24928 AC018630.2-201ENST00000534866 2403 ntBASIC2.28□□□□□ -2.04
POLR2AP24928 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.28□□□□□ -2.04
POLR2AP24928 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
POLR2AP24928 RNA5SP125-201ENST00000364843 120 ntBASIC2.28□□□□□ -2.04
POLR2AP24928 RNU6-418P-201ENST00000384035 107 ntBASIC2.28□□□□□ -2.04
POLR2AP24928 Y_RNA.508-201ENST00000384502 114 ntBASIC2.28□□□□□ -2.04
POLR2AP24928 RNU6-589P-201ENST00000516485 107 ntBASIC2.28□□□□□ -2.04
POLR2AP24928 AC025647.1-201ENST00000517879 253 ntBASIC2.28□□□□□ -2.04
POLR2AP24928 MIR4255-201ENST00000579351 72 ntBASIC2.28□□□□□ -2.04
POLR2AP24928 AC108081.1-201ENST00000604358 221 ntBASIC2.28□□□□□ -2.04
POLR2AP24928 AL359821.1-201ENST00000605519 182 ntBASIC2.28□□□□□ -2.04
POLR2AP24928 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms