Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC010598.1-201ENST00000510378 103 ntBASIC1.34□□□□□ -2.19
CDX4O14627 RNU6-191P-201ENST00000516295 94 ntBASIC1.34□□□□□ -2.19
CDX4O14627 RNU1-142P-201ENST00000516682 145 ntBASIC1.34□□□□□ -2.19
CDX4O14627 SNORA31.17-201ENST00000516953 127 ntBASIC1.34□□□□□ -2.19
CDX4O14627 MIR4643-201ENST00000577473 78 ntBASIC1.34□□□□□ -2.19
CDX4O14627 AL359075.3-201ENST00000613288 217 ntBASIC1.34□□□□□ -2.19
CDX4O14627 AC006435.5-201ENST00000624486 112 ntBASIC1.34□□□□□ -2.19
CDX4O14627 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
CDX4O14627 AP000648.3-201ENST00000623539 4507 ntBASIC1.34□□□□□ -2.2
CDX4O14627 MIR424-201ENST00000362227 98 ntBASIC1.33□□□□□ -2.2
CDX4O14627 Y_RNA.60-201ENST00000362831 98 ntBASIC1.33□□□□□ -2.2
CDX4O14627 SNORD27-201ENST00000363981 72 ntBASIC1.33□□□□□ -2.2
CDX4O14627 Y_RNA.277-201ENST00000364754 102 ntBASIC1.33□□□□□ -2.2
CDX4O14627 Y_RNA.361-201ENST00000365515 120 ntBASIC1.33□□□□□ -2.2
CDX4O14627 RNU6-342P-201ENST00000384521 104 ntBASIC1.33□□□□□ -2.2
CDX4O14627 RNU6-296P-201ENST00000384608 107 ntBASIC1.33□□□□□ -2.2
CDX4O14627 RNU6-950P-201ENST00000384651 107 ntBASIC1.33□□□□□ -2.2
CDX4O14627 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CDX4O14627 RNU6-360P-201ENST00000390944 104 ntBASIC1.33□□□□□ -2.2
CDX4O14627 MIR873-201ENST00000401120 77 ntBASIC1.33□□□□□ -2.2
CDX4O14627 MIR934-201ENST00000401241 83 ntBASIC1.33□□□□□ -2.2
CDX4O14627 Y_RNA.618-201ENST00000410949 107 ntBASIC1.33□□□□□ -2.2
CDX4O14627 RNU6-651P-201ENST00000411040 105 ntBASIC1.33□□□□□ -2.2
CDX4O14627 AC245047.4-201ENST00000433189 144 ntBASIC1.33□□□□□ -2.2
CDX4O14627 AL135790.2-201ENST00000437701 267 ntBASIC1.33□□□□□ -2.2
CDX4O14627 COX6CP14-201ENST00000469580 174 ntBASIC1.33□□□□□ -2.2
CDX4O14627 RPS27P22-201ENST00000478056 241 ntBASIC1.33□□□□□ -2.2
CDX4O14627 RNA5SP20-201ENST00000515976 84 ntBASIC1.33□□□□□ -2.2
CDX4O14627 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
CDX4O14627 FAM106DP-201ENST00000586416 501 ntBASIC1.33□□□□□ -2.2
CDX4O14627 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.33□□□□□ -2.2
CDX4O14627 AC037487.3-201ENST00000606668 112 ntBASIC1.33□□□□□ -2.2
CDX4O14627 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.33□□□□□ -2.2
CDX4O14627 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
CDX4O14627 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.33□□□□□ -2.2
CDX4O14627 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
CDX4O14627 Y_RNA.117-201ENST00000363294 101 ntBASIC1.32□□□□□ -2.2
CDX4O14627 SNORA33-201ENST00000363664 130 ntBASIC1.32□□□□□ -2.2
CDX4O14627 SNORD114-27-201ENST00000363766 70 ntBASIC1.32□□□□□ -2.2
CDX4O14627 RNU6-379P-201ENST00000363813 104 ntBASIC1.32□□□□□ -2.2
CDX4O14627 SNORA63D-201ENST00000364359 132 ntBASIC1.32□□□□□ -2.2
CDX4O14627 RNU6-740P-201ENST00000364734 105 ntBASIC1.32□□□□□ -2.2
CDX4O14627 RNU6-439P-201ENST00000384188 106 ntBASIC1.32□□□□□ -2.2
CDX4O14627 RNU6-514P-201ENST00000384208 107 ntBASIC1.32□□□□□ -2.2
CDX4O14627 RNU6-136P-201ENST00000384663 107 ntBASIC1.32□□□□□ -2.2
CDX4O14627 RNA5SP467-201ENST00000391274 118 ntBASIC1.32□□□□□ -2.2
CDX4O14627 RNU6-1337P-201ENST00000516525 95 ntBASIC1.32□□□□□ -2.2
CDX4O14627 SNORA27.4-201ENST00000516650 95 ntBASIC1.32□□□□□ -2.2
CDX4O14627 RNU6-63P-201ENST00000516690 95 ntBASIC1.32□□□□□ -2.2
CDX4O14627 RNU6-1223P-201ENST00000517124 104 ntBASIC1.32□□□□□ -2.2
CDX4O14627 AL512605.2-201ENST00000592972 256 ntBASIC1.32□□□□□ -2.2
CDX4O14627 MIR8074-201ENST00000615081 81 ntBASIC1.32□□□□□ -2.2
CDX4O14627 U2.14-201ENST00000615943 113 ntBASIC1.32□□□□□ -2.2
CDX4O14627 Y_RNA.44-201ENST00000362676 108 ntBASIC1.31□□□□□ -2.2
CDX4O14627 RNU6-1048P-201ENST00000364054 107 ntBASIC1.31□□□□□ -2.2
CDX4O14627 SNORA20.1-201ENST00000364790 130 ntBASIC1.31□□□□□ -2.2
CDX4O14627 Y_RNA.352-201ENST00000365439 102 ntBASIC1.31□□□□□ -2.2
CDX4O14627 Y_RNA.416-201ENST00000384014 113 ntBASIC1.31□□□□□ -2.2
CDX4O14627 SNORD116-13-201ENST00000384408 92 ntBASIC1.31□□□□□ -2.2
CDX4O14627 Y_RNA.539-201ENST00000384635 107 ntBASIC1.31□□□□□ -2.2
CDX4O14627 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CDX4O14627 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.31□□□□□ -2.2
CDX4O14627 RNU6-855P-201ENST00000410395 104 ntBASIC1.31□□□□□ -2.2
CDX4O14627 RNU6-1186P-201ENST00000410429 97 ntBASIC1.31□□□□□ -2.2
CDX4O14627 HSPE1P9-201ENST00000440046 311 ntBASIC1.31□□□□□ -2.2
CDX4O14627 SUMO1P2-201ENST00000452524 304 ntBASIC1.31□□□□□ -2.2
CDX4O14627 RPS26P55-201ENST00000471178 356 ntBASIC1.31□□□□□ -2.2
CDX4O14627 AC004223.1-201ENST00000479840 271 ntBASIC1.31□□□□□ -2.2
CDX4O14627 AC023790.1-201ENST00000482174 347 ntBASIC1.31□□□□□ -2.2
CDX4O14627 RNU6-1023P-201ENST00000516137 106 ntBASIC1.31□□□□□ -2.2
CDX4O14627 RNU6-388P-201ENST00000517012 105 ntBASIC1.31□□□□□ -2.2
CDX4O14627 RNU6-389P-201ENST00000517048 105 ntBASIC1.31□□□□□ -2.2
CDX4O14627 MIR4438-201ENST00000585271 93 ntBASIC1.31□□□□□ -2.2
CDX4O14627 U6.73-201ENST00000619194 103 ntBASIC1.31□□□□□ -2.2
CDX4O14627 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CDX4O14627 AC134026.1-201ENST00000623249 2239 ntBASIC1.31□□□□□ -2.2
CDX4O14627 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CDX4O14627 Y_RNA.65-201ENST00000362846 100 ntBASIC1.3□□□□□ -2.2
CDX4O14627 RNU6-271P-201ENST00000363858 105 ntBASIC1.3□□□□□ -2.2
CDX4O14627 RNU6-801P-201ENST00000364087 105 ntBASIC1.3□□□□□ -2.2
CDX4O14627 Y_RNA.275-201ENST00000364726 110 ntBASIC1.3□□□□□ -2.2
CDX4O14627 Y_RNA.341-201ENST00000365341 102 ntBASIC1.3□□□□□ -2.2
CDX4O14627 RNU6-338P-201ENST00000383888 105 ntBASIC1.3□□□□□ -2.2
CDX4O14627 Y_RNA.476-201ENST00000384347 108 ntBASIC1.3□□□□□ -2.2
CDX4O14627 RNU6-1289P-201ENST00000384431 106 ntBASIC1.3□□□□□ -2.2
CDX4O14627 MT-TG-201ENST00000387429 68 ntBASIC1.3□□□□□ -2.2
CDX4O14627 SNORA40.6-201ENST00000391153 128 ntBASIC1.3□□□□□ -2.2
CDX4O14627 MIR1267-201ENST00000408723 78 ntBASIC1.3□□□□□ -2.2
CDX4O14627 MIR548H3-201ENST00000408771 118 ntBASIC1.3□□□□□ -2.2
CDX4O14627 RNU2-14P-201ENST00000411053 191 ntBASIC1.3□□□□□ -2.2
CDX4O14627 COX6CP10-201ENST00000416832 224 ntBASIC1.3□□□□□ -2.2
CDX4O14627 AC010154.1-201ENST00000425857 269 ntBASIC1.3□□□□□ -2.2
CDX4O14627 AC024067.1-201ENST00000426199 223 ntBASIC1.3□□□□□ -2.2
CDX4O14627 RNU7-94P-201ENST00000459576 63 ntBASIC1.3□□□□□ -2.2
CDX4O14627 SNORA70.12-201ENST00000516084 153 ntBASIC1.3□□□□□ -2.2
CDX4O14627 RNU6-111P-201ENST00000517179 105 ntBASIC1.3□□□□□ -2.2
CDX4O14627 MIR3671-201ENST00000580455 88 ntBASIC1.3□□□□□ -2.2
CDX4O14627 AC005357.1-201ENST00000588399 301 ntBASIC1.3□□□□□ -2.2
CDX4O14627 AC090425.1-201ENST00000610007 140 ntBASIC1.3□□□□□ -2.2
CDX4O14627 MIR6788-201ENST00000618842 66 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms