Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RNU6-728P-201ENST00000365375 104 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 Y_RNA.357-201ENST00000365487 109 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 SNORA48.1-201ENST00000390879 135 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 RNU6-1135P-201ENST00000411083 103 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 RNU5E-9P-201ENST00000411164 104 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 AC245047.4-201ENST00000433189 144 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 SEPT7P4-201ENST00000437076 306 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 SUMO1P3-201ENST00000439961 304 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 AC011753.1-201ENST00000451001 220 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 AL021397.1-201ENST00000451806 248 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 snoU13.23-201ENST00000458863 104 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 HMGN1P7-201ENST00000491722 313 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 SNORA31.25-201ENST00000517242 134 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 DEFB122-202ENST00000569013 197 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 AL365434.2-201ENST00000607979 234 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
PTPDC1A2A3K4 SNORA1B-201ENST00000362535 133 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 Y_RNA.253-201ENST00000364562 112 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 RNA5SP160-201ENST00000364866 120 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 Y_RNA.587-201ENST00000391210 103 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 AC245047.3-201ENST00000429428 127 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 AL121914.1-201ENST00000450188 156 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 RPS27P1-201ENST00000450552 247 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 RNU6-717P-201ENST00000459076 104 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 SNORD11-201ENST00000459124 84 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 AL049830.1-201ENST00000468034 425 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 RNVU1-2-201ENST00000516326 135 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 RNU2-56P-201ENST00000516826 190 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 MIR4529-201ENST00000578110 78 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 MIR4431-201ENST00000579990 94 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 AC245884.12-201ENST00000615364 59 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 AC012640.5-201ENST00000623897 319 ntBASIC2.44□□□□□ -2.02
PTPDC1A2A3K4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 RNU4-84P-201ENST00000364200 139 ntBASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 MIR15B-201ENST00000385045 98 ntBASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 MIR524-201ENST00000385242 87 ntBASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 RNA5SP109-201ENST00000391010 116 ntBASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 AL606517.2-201ENST00000442855 241 ntBASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 AC108210.2-201ENST00000503681 201 ntBASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 RNU7-193P-201ENST00000516723 65 ntBASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 RNU6-255P-201ENST00000516957 105 ntBASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 IGLV3-17-201ENST00000519099 244 ntBASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 MIR3144-201ENST00000579460 79 ntBASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 AL049861.1-201ENST00000603130 150 ntBASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 AC104465.1-201ENST00000611365 139 ntBASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 uc_338.4-201ENST00000616635 176 ntBASIC2.43□□□□□ -2.02
PTPDC1A2A3K4 Y_RNA.272-201ENST00000364696 102 ntBASIC2.42□□□□□ -2.02
PTPDC1A2A3K4 MIR548M-201ENST00000408260 86 ntBASIC2.42□□□□□ -2.02
PTPDC1A2A3K4 RNA5SP338-201ENST00000410495 85 ntBASIC2.42□□□□□ -2.02
PTPDC1A2A3K4 RNA5SP501-201ENST00000410990 112 ntBASIC2.42□□□□□ -2.02
PTPDC1A2A3K4 RNU2-55P-201ENST00000411146 174 ntBASIC2.42□□□□□ -2.02
PTPDC1A2A3K4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
PTPDC1A2A3K4 AL591806.2-201ENST00000433122 173 ntBASIC2.42□□□□□ -2.02
PTPDC1A2A3K4 MTND2P29-201ENST00000438595 412 ntBASIC2.42□□□□□ -2.02
PTPDC1A2A3K4 RNU6-561P-201ENST00000516222 102 ntBASIC2.42□□□□□ -2.02
PTPDC1A2A3K4 U1.36-201ENST00000620684 176 ntBASIC2.42□□□□□ -2.02
PTPDC1A2A3K4 AC021753.1-201ENST00000635724 168 ntBASIC2.42□□□□□ -2.02
PTPDC1A2A3K4 RNU6-804P-201ENST00000384286 107 ntBASIC2.41□□□□□ -2.02
PTPDC1A2A3K4 RNU4-43P-201ENST00000410628 137 ntBASIC2.41□□□□□ -2.02
PTPDC1A2A3K4 SNRPGP10-201ENST00000432323 225 ntBASIC2.41□□□□□ -2.02
PTPDC1A2A3K4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.41□□□□□ -2.02
PTPDC1A2A3K4 AC025033.1-201ENST00000463883 194 ntBASIC2.41□□□□□ -2.02
PTPDC1A2A3K4 SUB1P4-201ENST00000566062 339 ntBASIC2.41□□□□□ -2.02
PTPDC1A2A3K4 AP000553.5-201ENST00000641933 54 ntBASIC2.41□□□□□ -2.02
PTPDC1A2A3K4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PTPDC1A2A3K4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
PTPDC1A2A3K4 SNORD45.3-201ENST00000363836 72 ntBASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 SNORA63D-201ENST00000364359 132 ntBASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 RNU6-239P-201ENST00000390990 99 ntBASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 Y_RNA.580-201ENST00000391004 95 ntBASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 Y_RNA.622-201ENST00000411091 108 ntBASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 RNA5SP450-201ENST00000411206 102 ntBASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 SNRPGP8-201ENST00000454064 226 ntBASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 AC107027.2-201ENST00000512197 115 ntBASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 SNORD77.4-201ENST00000516158 81 ntBASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 AC015712.3-201ENST00000559380 164 ntBASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 AL591926.4-201ENST00000616895 298 ntBASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 MIR8054-201ENST00000620877 86 ntBASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
PTPDC1A2A3K4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PTPDC1A2A3K4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PTPDC1A2A3K4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
PTPDC1A2A3K4 MIR126-201ENST00000362291 85 ntBASIC2.39□□□□□ -2.03
PTPDC1A2A3K4 Y_RNA.8-201ENST00000362353 102 ntBASIC2.39□□□□□ -2.03
PTPDC1A2A3K4 Y_RNA.170-201ENST00000363746 110 ntBASIC2.39□□□□□ -2.03
PTPDC1A2A3K4 RNA5SP37-201ENST00000365420 130 ntBASIC2.39□□□□□ -2.03
PTPDC1A2A3K4 RNU6-643P-201ENST00000384018 107 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms