Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 AL499627.1-201ENST00000569373 2188 ntBASIC21.57■■□□□ 1.04
CLIC4Q9Y696 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.57■■□□□ 1.04
CLIC4Q9Y696 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 MTMR9LP-203ENST00000426597 1545 ntBASIC21.57■■□□□ 1.04
CLIC4Q9Y696 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 AC004951.3-201ENST00000418645 1148 ntBASIC21.57■■□□□ 1.04
CLIC4Q9Y696 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CLIC4Q9Y696 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 AC135050.7-201ENST00000624508 2218 ntBASIC21.56■■□□□ 1.04
CLIC4Q9Y696 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 AC011506.1-201ENST00000474329 610 ntBASIC21.56■■□□□ 1.04
CLIC4Q9Y696 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 ITM2C-210ENST00000620962 501 ntBASIC21.56■■□□□ 1.04
CLIC4Q9Y696 AC068587.9-201ENST00000641814 219 ntBASIC21.56■■□□□ 1.04
CLIC4Q9Y696 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLIC4Q9Y696 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 FAM201B-201ENST00000458407 597 ntBASIC21.55■■□□□ 1.04
CLIC4Q9Y696 PRSS44-201ENST00000515154 1146 ntBASIC21.55■■□□□ 1.04
CLIC4Q9Y696 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 RARRES2P10-201ENST00000564312 460 ntBASIC21.55■■□□□ 1.04
CLIC4Q9Y696 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLIC4Q9Y696 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 PRORSD1P-201ENST00000295112 541 ntBASIC21.54■■□□□ 1.04
CLIC4Q9Y696 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 AC011298.2-201ENST00000617989 482 ntBASIC21.54■■□□□ 1.04
CLIC4Q9Y696 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLIC4Q9Y696 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms