Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.89■□□□□ 0.93
Q9Y3F1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Q9Y3F1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.89■□□□□ 0.93
Q9Y3F1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Q9Y3F1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Q9Y3F1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.89■□□□□ 0.93
Q9Y3F1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.89■□□□□ 0.93
Q9Y3F1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.89■□□□□ 0.93
Q9Y3F1 AC005332.3-201ENST00000589904 676 ntBASIC20.89■□□□□ 0.93
Q9Y3F1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Q9Y3F1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Q9Y3F1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Q9Y3F1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Q9Y3F1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.89■□□□□ 0.93
Q9Y3F1 Z83836.1-201ENST00000624605 1642 ntBASIC20.89■□□□□ 0.93
Q9Y3F1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Q9Y3F1 AC112907.3-201ENST00000577781 2400 ntBASIC20.88■□□□□ 0.93
Q9Y3F1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Q9Y3F1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9Y3F1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Q9Y3F1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.88■□□□□ 0.93
Q9Y3F1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Q9Y3F1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9Y3F1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9Y3F1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9Y3F1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9Y3F1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Q9Y3F1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9Y3F1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9Y3F1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.88■□□□□ 0.93
Q9Y3F1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9Y3F1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9Y3F1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.88■□□□□ 0.93
Q9Y3F1 LINC00265-3P-201ENST00000447588 903 ntBASIC20.88■□□□□ 0.93
Q9Y3F1 AP003733.1-201ENST00000491725 852 ntBASIC20.88■□□□□ 0.93
Q9Y3F1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.88■□□□□ 0.93
Q9Y3F1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.88■□□□□ 0.93
Q9Y3F1 AL390719.2-201ENST00000606993 987 ntBASIC20.88■□□□□ 0.93
Q9Y3F1 IFNL4P1-201ENST00000607083 540 ntBASIC20.88■□□□□ 0.93
Q9Y3F1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.88■□□□□ 0.93
Q9Y3F1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Q9Y3F1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9Y3F1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.88■□□□□ 0.93
Q9Y3F1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Q9Y3F1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.88■□□□□ 0.93
Q9Y3F1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Q9Y3F1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9Y3F1 KRT8P10-201ENST00000450021 1447 ntBASIC20.87■□□□□ 0.93
Q9Y3F1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.87■□□□□ 0.93
Q9Y3F1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9Y3F1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.87■□□□□ 0.93
Q9Y3F1 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.87■□□□□ 0.93
Q9Y3F1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.87■□□□□ 0.93
Q9Y3F1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Q9Y3F1 AP000867.3-201ENST00000524675 377 ntBASIC20.87■□□□□ 0.93
Q9Y3F1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.87■□□□□ 0.93
Q9Y3F1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.87■□□□□ 0.93
Q9Y3F1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9Y3F1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Q9Y3F1 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.87■□□□□ 0.93
Q9Y3F1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9Y3F1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9Y3F1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Q9Y3F1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9Y3F1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9Y3F1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.87■□□□□ 0.93
Q9Y3F1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9Y3F1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.86■□□□□ 0.93
Q9Y3F1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Q9Y3F1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9Y3F1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Q9Y3F1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Q9Y3F1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9Y3F1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9Y3F1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.86■□□□□ 0.93
Q9Y3F1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Q9Y3F1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Q9Y3F1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Q9Y3F1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Q9Y3F1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9Y3F1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Q9Y3F1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9Y3F1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.86■□□□□ 0.93
Q9Y3F1 TOB2P1-201ENST00000469761 992 ntBASIC20.86■□□□□ 0.93
Q9Y3F1 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.86■□□□□ 0.93
Q9Y3F1 AC091304.2-201ENST00000564639 760 ntBASIC20.86■□□□□ 0.93
Q9Y3F1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9Y3F1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9Y3F1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Q9Y3F1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.86■□□□□ 0.93
Q9Y3F1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Q9Y3F1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9Y3F1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Q9Y3F1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.86■□□□□ 0.93
Q9Y3F1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Q9Y3F1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Q9Y3F1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
Q9Y3F1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.85■□□□□ 0.93
Q9Y3F1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.85■□□□□ 0.93
Q9Y3F1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms