Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 CD99P1-205ENST00000527459 561 ntBASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HHLA3Q9XRX5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 AC099398.1-201ENST00000567919 2776 ntBASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 ESRRAP1-201ENST00000400596 1257 ntBASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 AC008403.3-201ENST00000598924 454 ntBASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 AL161938.1-201ENST00000569833 2180 ntBASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 AC106820.2-201ENST00000563775 3264 ntBASIC13.81□□□□□ -0.2
HHLA3Q9XRX5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 YBX1P10-201ENST00000444752 975 ntBASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.8□□□□□ -0.2
HHLA3Q9XRX5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms