Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC012615.1-201ENST00000565797 1299 ntBASIC29.17■■■□□ 2.26
CDK11AQ9UQ88 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDK11AQ9UQ88 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDK11AQ9UQ88 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDK11AQ9UQ88 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
CDK11AQ9UQ88 KATNBL1P6-202ENST00000562413 1466 ntBASIC29.17■■■□□ 2.26
CDK11AQ9UQ88 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC29.16■■■□□ 2.26
CDK11AQ9UQ88 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDK11AQ9UQ88 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CDK11AQ9UQ88 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CDK11AQ9UQ88 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDK11AQ9UQ88 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CDK11AQ9UQ88 AL121772.3-201ENST00000610840 674 ntBASIC29.16■■■□□ 2.26
CDK11AQ9UQ88 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDK11AQ9UQ88 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDK11AQ9UQ88 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDK11AQ9UQ88 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC29.16■■■□□ 2.26
CDK11AQ9UQ88 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 ENSA-205ENST00000361532 792 ntTSL 2 BASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 LINC00265-3P-201ENST00000447588 903 ntBASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CDK11AQ9UQ88 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 AP000867.3-201ENST00000524675 377 ntBASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 TEX21P-204ENST00000641479 1693 ntBASIC29.14■■■□□ 2.26
CDK11AQ9UQ88 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 MIR3180-4-201ENST00000582223 153 ntBASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 AC090616.6-201ENST00000582640 721 ntBASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC29.13■■■□□ 2.25
CDK11AQ9UQ88 Z83836.1-201ENST00000624605 1642 ntBASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 MIR564-202ENST00000385049 94 ntBASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 PVRIG2P-201ENST00000435460 978 ntBASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 TOB2P1-201ENST00000469761 992 ntBASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 PNN-202ENST00000553331 656 ntTSL 3 BASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 AC091304.2-201ENST00000564639 760 ntBASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 AL732292.2-201ENST00000609649 430 ntBASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
CDK11AQ9UQ88 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CDK11AQ9UQ88 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC29.11■■■□□ 2.25
CDK11AQ9UQ88 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CDK11AQ9UQ88 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC29.11■■■□□ 2.25
CDK11AQ9UQ88 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CDK11AQ9UQ88 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CDK11AQ9UQ88 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
CDK11AQ9UQ88 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CDK11AQ9UQ88 ELP6-205ENST00000439305 880 ntTSL 2 BASIC29.11■■■□□ 2.25
CDK11AQ9UQ88 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC29.11■■■□□ 2.25
CDK11AQ9UQ88 EMBP1-201ENST00000458200 901 ntBASIC29.11■■■□□ 2.25
CDK11AQ9UQ88 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC29.11■■■□□ 2.25
CDK11AQ9UQ88 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CDK11AQ9UQ88 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CDK11AQ9UQ88 LINC01006-201ENST00000333319 2292 ntBASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
CDK11AQ9UQ88 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC29.1■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms