Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 AL671277.2-201ENST00000458060 996 ntBASIC18.47■□□□□ 0.55
SATB2Q9UPW6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SATB2Q9UPW6 AC009237.14-201ENST00000609975 1594 ntBASIC18.47■□□□□ 0.55
SATB2Q9UPW6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 TPM4P1-201ENST00000436100 807 ntBASIC18.46■□□□□ 0.55
SATB2Q9UPW6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.46■□□□□ 0.55
SATB2Q9UPW6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SATB2Q9UPW6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
SATB2Q9UPW6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
SATB2Q9UPW6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 AL441883.1-201ENST00000566170 1045 ntBASIC18.45■□□□□ 0.54
SATB2Q9UPW6 AL160286.2-201ENST00000567150 934 ntBASIC18.45■□□□□ 0.54
SATB2Q9UPW6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 AP001271.2-201ENST00000624018 1556 ntBASIC18.45■□□□□ 0.54
SATB2Q9UPW6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.45■□□□□ 0.54
SATB2Q9UPW6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SATB2Q9UPW6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SATB2Q9UPW6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SATB2Q9UPW6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.44■□□□□ 0.54
SATB2Q9UPW6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SATB2Q9UPW6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SATB2Q9UPW6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SATB2Q9UPW6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
SATB2Q9UPW6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SATB2Q9UPW6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms