Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 TPSP2-201ENST00000561760 610 ntBASIC17.85■□□□□ 0.45
LHX6Q9UPM6 AC132872.1-201ENST00000566986 1195 ntBASIC17.85■□□□□ 0.45
LHX6Q9UPM6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 AC138894.3-201ENST00000603787 634 ntBASIC17.85■□□□□ 0.45
LHX6Q9UPM6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LHX6Q9UPM6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 DRAXINP1-201ENST00000437611 948 ntBASIC17.84■□□□□ 0.45
LHX6Q9UPM6 AC034232.1-201ENST00000506026 1064 ntBASIC17.84■□□□□ 0.45
LHX6Q9UPM6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 AC106730.1-201ENST00000566722 1090 ntBASIC17.84■□□□□ 0.45
LHX6Q9UPM6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.84■□□□□ 0.45
LHX6Q9UPM6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LHX6Q9UPM6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
LHX6Q9UPM6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LHX6Q9UPM6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LHX6Q9UPM6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.83■□□□□ 0.45
LHX6Q9UPM6 AIRN-201ENST00000601203 4374 ntBASIC17.83■□□□□ 0.45
LHX6Q9UPM6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LHX6Q9UPM6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LHX6Q9UPM6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LHX6Q9UPM6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.83■□□□□ 0.45
LHX6Q9UPM6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
LHX6Q9UPM6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LHX6Q9UPM6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LHX6Q9UPM6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.83■□□□□ 0.44
LHX6Q9UPM6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LHX6Q9UPM6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LHX6Q9UPM6 HTR5BP-201ENST00000430851 1154 ntBASIC17.83■□□□□ 0.44
LHX6Q9UPM6 Z85996.1-201ENST00000494644 937 ntBASIC17.83■□□□□ 0.44
LHX6Q9UPM6 RNPS1P1-201ENST00000507437 918 ntBASIC17.83■□□□□ 0.44
LHX6Q9UPM6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.83■□□□□ 0.44
LHX6Q9UPM6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LHX6Q9UPM6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.83■□□□□ 0.44
LHX6Q9UPM6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.83■□□□□ 0.44
LHX6Q9UPM6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.83■□□□□ 0.44
LHX6Q9UPM6 AC055717.3-201ENST00000622967 595 ntBASIC17.83■□□□□ 0.44
LHX6Q9UPM6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LHX6Q9UPM6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LHX6Q9UPM6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.83■□□□□ 0.44
LHX6Q9UPM6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.83■□□□□ 0.44
LHX6Q9UPM6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.82■□□□□ 0.44
LHX6Q9UPM6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX6Q9UPM6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.82■□□□□ 0.44
LHX6Q9UPM6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX6Q9UPM6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.82■□□□□ 0.44
LHX6Q9UPM6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.82■□□□□ 0.44
LHX6Q9UPM6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX6Q9UPM6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LHX6Q9UPM6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LHX6Q9UPM6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX6Q9UPM6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LHX6Q9UPM6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX6Q9UPM6 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LHX6Q9UPM6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms