Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.71■■□□□ 1.07
DDX41Q9UJV9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX41Q9UJV9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX41Q9UJV9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX41Q9UJV9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.71■■□□□ 1.07
DDX41Q9UJV9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.71■■□□□ 1.07
DDX41Q9UJV9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX41Q9UJV9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.71■■□□□ 1.07
DDX41Q9UJV9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX41Q9UJV9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
DDX41Q9UJV9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX41Q9UJV9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
DDX41Q9UJV9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX41Q9UJV9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX41Q9UJV9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
DDX41Q9UJV9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 AL049812.1-201ENST00000432563 2267 ntBASIC21.7■■□□□ 1.06
DDX41Q9UJV9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 CA15P1-201ENST00000481698 905 ntBASIC21.7■■□□□ 1.06
DDX41Q9UJV9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX41Q9UJV9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 AK4P3-201ENST00000418260 669 ntBASIC21.69■■□□□ 1.06
DDX41Q9UJV9 AC117947.1-201ENST00000427448 529 ntBASIC21.69■■□□□ 1.06
DDX41Q9UJV9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX41Q9UJV9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX41Q9UJV9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX41Q9UJV9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms