Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 SEC1P-202ENST00000473944 940 ntBASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 AC008556.1-201ENST00000610908 2040 ntBASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK2Q9NRA0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 SPDYE13P-201ENST00000445314 798 ntBASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 AC092597.1-201ENST00000487352 616 ntBASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 AC093458.2-201ENST00000623150 629 ntBASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 FP475955.4-201ENST00000623131 1990 ntBASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.28■□□□□ 0.68
SPHK2Q9NRA0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPHK2Q9NRA0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
SPHK2Q9NRA0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.27■□□□□ 0.67
SPHK2Q9NRA0 AFG3L1P-217ENST00000557444 2447 ntBASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 AC069148.1-201ENST00000608741 768 ntBASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 KRT8P32-201ENST00000512863 1461 ntBASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
SPHK2Q9NRA0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SPHK2Q9NRA0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK2Q9NRA0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK2Q9NRA0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK2Q9NRA0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK2Q9NRA0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms