Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.89■□□□□ 0.61
TM9SF3Q9HD45 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 AL136038.3-201ENST00000561909 1096 ntBASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 MIR4674-201ENST00000582457 87 ntBASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.88■□□□□ 0.61
TM9SF3Q9HD45 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 STARP1-201ENST00000397973 869 ntBASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 ZNF444P1-201ENST00000559497 298 ntBASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 AC083849.1-201ENST00000615227 514 ntBASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TM9SF3Q9HD45 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 AL121894.2-201ENST00000602977 491 ntBASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 AC069148.1-201ENST00000608741 768 ntBASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 HYMAI.1-201ENST00000620949 238 ntBASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 AL158211.5-201ENST00000623583 2518 ntBASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.86■□□□□ 0.61
TM9SF3Q9HD45 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 HCG4P8-203ENST00000443049 980 ntBASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 AC104417.2-201ENST00000562989 1793 ntBASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
TM9SF3Q9HD45 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms