Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 FEM1AP1-201ENST00000431297 1995 ntBASIC17.57■□□□□ 0.4
CHD8Q9HCK8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 AP002472.1-201ENST00000577490 586 ntBASIC17.57■□□□□ 0.4
CHD8Q9HCK8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 PLK5-205ENST00000642079 1969 ntBASIC17.56■□□□□ 0.4
CHD8Q9HCK8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 DUX4L17-201ENST00000557360 1267 ntBASIC17.56■□□□□ 0.4
CHD8Q9HCK8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 AL078644.1-201ENST00000609881 752 ntBASIC17.56■□□□□ 0.4
CHD8Q9HCK8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.56■□□□□ 0.4
CHD8Q9HCK8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 AC011840.4-201ENST00000578471 627 ntBASIC17.55■□□□□ 0.4
CHD8Q9HCK8 MIR4469-201ENST00000583919 79 ntBASIC17.55■□□□□ 0.4
CHD8Q9HCK8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 AL023284.2-201ENST00000405850 579 ntBASIC17.55■□□□□ 0.4
CHD8Q9HCK8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 MEIS3P1-201ENST00000495167 958 ntBASIC17.55■□□□□ 0.4
CHD8Q9HCK8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHD8Q9HCK8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 AC008735.5-201ENST00000623544 497 ntBASIC17.54■□□□□ 0.4
CHD8Q9HCK8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 FP700111.2-201ENST00000619190 1892 ntBASIC17.54■□□□□ 0.4
CHD8Q9HCK8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 IGHV3-41-201ENST00000613121 348 ntBASIC17.54■□□□□ 0.4
CHD8Q9HCK8 AC093512.1-201ENST00000617969 520 ntBASIC17.54■□□□□ 0.4
CHD8Q9HCK8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHD8Q9HCK8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 AC092474.2-201ENST00000424288 719 ntBASIC17.53■□□□□ 0.4
CHD8Q9HCK8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 AC087641.1-201ENST00000557561 1021 ntBASIC17.53■□□□□ 0.4
CHD8Q9HCK8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 GPR32P1-201ENST00000601788 811 ntBASIC17.53■□□□□ 0.4
CHD8Q9HCK8 AC027612.4-201ENST00000605371 583 ntBASIC17.53■□□□□ 0.4
CHD8Q9HCK8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CHD8Q9HCK8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms