Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
EFCC1Q9HA90 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.96■■□□□ 1.11
EFCC1Q9HA90 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
EFCC1Q9HA90 AC091304.2-201ENST00000564639 760 ntBASIC21.96■■□□□ 1.11
EFCC1Q9HA90 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.96■■□□□ 1.11
EFCC1Q9HA90 LINC01711-201ENST00000598340 967 ntBASIC21.96■■□□□ 1.11
EFCC1Q9HA90 AC139530.3-201ENST00000620344 690 ntBASIC21.96■■□□□ 1.11
EFCC1Q9HA90 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
EFCC1Q9HA90 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
EFCC1Q9HA90 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.96■■□□□ 1.11
EFCC1Q9HA90 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
EFCC1Q9HA90 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
EFCC1Q9HA90 AC009237.14-201ENST00000609975 1594 ntBASIC21.95■■□□□ 1.11
EFCC1Q9HA90 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.95■■□□□ 1.1
EFCC1Q9HA90 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.95■■□□□ 1.1
EFCC1Q9HA90 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
EFCC1Q9HA90 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 AL121772.3-201ENST00000610840 674 ntBASIC21.94■■□□□ 1.1
EFCC1Q9HA90 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
EFCC1Q9HA90 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 KRT18P1-202ENST00000452408 1331 ntBASIC21.93■■□□□ 1.1
EFCC1Q9HA90 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EFCC1Q9HA90 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
EFCC1Q9HA90 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
EFCC1Q9HA90 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.92■■□□□ 1.1
EFCC1Q9HA90 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
EFCC1Q9HA90 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
EFCC1Q9HA90 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
EFCC1Q9HA90 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
EFCC1Q9HA90 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.92■■□□□ 1.1
EFCC1Q9HA90 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
EFCC1Q9HA90 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
EFCC1Q9HA90 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.92■■□□□ 1.1
EFCC1Q9HA90 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
EFCC1Q9HA90 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms